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  5. AMTR_s00235p00022600

AMTR_s00235p00022600 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00235.7

Description : Protein biosynthesis.organelle translation machineries.mitochondrial ribosome.small subunit proteome.mtRPS2 component


Gene families : OG0011371 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011371_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: AMTR_s00235p00022600

Target Alias Description ECC score Gene Family Method Actions
Gb_09631 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Gb_13243 RPS2 component mtRPS2 of small ribosomal subunit proteome 0.08 OrthoFinder output from all 47 species
Pir_g61518 No alias component *(uS2m) of small mitoribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Zm00001e042114_P001 RPS2, Zm00001e042114 component mtRPS2 of small ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
Zm00001e042303_P001 RPS2, Zm00001e042303 component mtRPS2 of small ribosomal subunit proteome 0.02 OrthoFinder output from all 47 species
Zm00001e042408_P001 RPS2, Zm00001e042408 component mtRPS2 of small ribosomal subunit proteome 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005622 intracellular anatomical structure IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003954 NADH dehydrogenase activity IEP HCCA
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP HCCA
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
BP GO:0042773 ATP synthesis coupled electron transport IEP HCCA
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP HCCA
InterPro domains Description Start Stop
IPR001865 Ribosomal_S2 2 44
No external refs found!