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  5. AMTR_s00216p00024860

AMTR_s00216p00024860 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00216.5

No description available


Gene families : OG0011580 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011580_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00216p00024860

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00215p00018550 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s02880p00006840 D3, CER5,... No description available 0.06 OrthoFinder output from all 47 species
AMTR_s05727p00005230 ATPDR13, PDR13,... No description available 0.03 OrthoFinder output from all 47 species
LOC_Os10g08010.1 LOC_Os10g08010 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Sam_g07490 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g31069 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005618 cell wall IEP HCCA
MF GO:0008146 sulfotransferase activity IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0050662 obsolete coenzyme binding IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA

No InterPro domains available for this sequence

No external refs found!