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  5. AMTR_s00205p00026120

AMTR_s00205p00026120 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00205.3

Description : Disease resistance protein RPM1 OS=Arabidopsis thaliana


Gene families : OG0000422 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000422_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00205p00026120

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00055p00179190 RPP13,... No description available 0.01 OrthoFinder output from all 47 species
AMTR_s00061p00205330 evm_27.TU.AmTr_v1... Probable disease resistance RPP8-like protein 2... 0.03 OrthoFinder output from all 47 species
AMTR_s00088p00057720 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00090p00087950 RPP13,... Disease resistance protein RPP13 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00090p00137350 RPP13,... Disease resistance protein RPP13 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AT1G10920 LOV1 NB-ARC domain-containing disease resistance protein 0.03 OrthoFinder output from all 47 species
AT1G58602 No alias LRR and NB-ARC domains-containing disease resistance protein 0.04 OrthoFinder output from all 47 species
AT3G46710 No alias NB-ARC domain-containing disease resistance protein 0.05 OrthoFinder output from all 47 species
AT3G46730 No alias NB-ARC domain-containing disease resistance protein 0.02 OrthoFinder output from all 47 species
AT5G43470 HRT, RCY1, RPP8 Disease resistance protein (CC-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
Aop_g60132 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
ChrUn.fgenesh.mRNA.29 RPM1, RPS3 Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
GSVIVT01012169001 RPM1, RPS3 Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01024114001 No alias External stimuli response.biotic stress.pathogen... 0.01 OrthoFinder output from all 47 species
GSVIVT01026745001 No alias Putative disease resistance protein At1g50180... 0.02 OrthoFinder output from all 47 species
GSVIVT01026825001 No alias Putative disease resistance protein At1g50180... 0.01 OrthoFinder output from all 47 species
GSVIVT01032826001 No alias Disease resistance RPP8-like protein 3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01032830001 No alias Probable disease resistance RPP8-like protein 2... 0.03 OrthoFinder output from all 47 species
LOC_Os02g35210.1 LOC_Os02g35210 no description available(sp|q2r8l1|rga5s_orysj : 458.0) 0.01 OrthoFinder output from all 47 species
LOC_Os04g02120.1 LOC_Os04g02120 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os04g11760.1 LOC_Os04g11760 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os04g11780.1 LOC_Os04g11780 no description available(sp|f7j0n2|rga5r_orysj : 115.0) 0.03 OrthoFinder output from all 47 species
LOC_Os04g14220.2 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os08g07920.1 LOC_Os08g07920 no description available(sp|q2qzf1|pik6_orysj : 119.0) 0.03 OrthoFinder output from all 47 species
LOC_Os08g14800.1 LOC_Os08g14800 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os08g14810.1 ZAR1, LOC_Os08g14810 no description available(sp|p0do08|pikm2_orysj : 132.0) 0.03 OrthoFinder output from all 47 species
LOC_Os08g28570.1 LOC_Os08g28570 no description available(sp|q2r8l1|rga5s_orysj : 394.0) 0.04 OrthoFinder output from all 47 species
LOC_Os08g28600.1 LOC_Os08g28600 no description available(sp|f7j0n2|rga5r_orysj : 439.0) 0.03 OrthoFinder output from all 47 species
LOC_Os10g03570.1 LOC_Os10g03570 no description available(sp|q2r8l1|rga5s_orysj : 283.0) 0.03 OrthoFinder output from all 47 species
LOC_Os11g11960.1 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os11g12040.1 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
LOC_Os11g12320.1 ZAR1, LOC_Os11g12320 Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os11g12340.2 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os11g41170.1 LOC_Os11g41170 no description available(sp|p0do08|pikm2_orysj : 199.0) 0.02 OrthoFinder output from all 47 species
LOC_Os11g41210.1 LOC_Os11g41210 no description available(sp|q2r8l1|rga5s_orysj : 81.6) 0.02 OrthoFinder output from all 47 species
LOC_Os11g46140.1 LOC_Os11g46140 no description available(sp|f7j0n2|rga5r_orysj : 149.0) 0.04 OrthoFinder output from all 47 species
LOC_Os12g17420.1 RPM1, RPS3,... no description available(sp|q2r8l1|rga5s_orysj : 165.0) 0.02 OrthoFinder output from all 47 species
LOC_Os12g17430.1 LOC_Os12g17430 no description available(sp|p0do08|pikm2_orysj : 108.0) 0.03 OrthoFinder output from all 47 species
LOC_Os12g17480.1 LOC_Os12g17480 no description available(sp|q2r8l1|rga5s_orysj : 343.0) 0.03 OrthoFinder output from all 47 species
Solyc03g005670.3.1 Solyc03g005670 Disease resistance RPP8-like protein 3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc04g009240.2.1 RPP13, Solyc04g009240 Disease resistance protein RPP13 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc04g009290.1.1 RPP13, Solyc04g009290 Disease resistance protein RPP13 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Zm00001e008806_P001 Zm00001e008806 no description available(sp|q2r8l1|rga5s_orysj : 238.0) 0.03 OrthoFinder output from all 47 species
Zm00001e010878_P001 RPM1, RPS3,... no description available(sp|q2r8l1|rga5s_orysj : 230.0) 0.02 OrthoFinder output from all 47 species
Zm00001e024479_P001 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002182 NB-ARC 7 84
No external refs found!