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  5. AMTR_s00203p00014740

AMTR_s00203p00014740 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00203.4

Description : La-related protein 1C OS=Arabidopsis thaliana


Gene families : OG0000608 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000608_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00203p00014740
Cluster HCCA: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
Adi_g019211 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g020043 No alias XRN4-exoribonuclease cofactor *(LARP1) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene47834.t1 Aspi01Gene47834 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g14982 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g19632 No alias XRN4-exoribonuclease cofactor *(LARP1) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004221 obsolete ubiquitin thiolesterase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR006630 La_HTH 357 414
No external refs found!