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  5. AMTR_s00198p00016850

AMTR_s00198p00016850 (VFB3,...)


Aliases : VFB3, evm_27.TU.AmTr_v1.0_scaffold00198.3

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.F-BOX substrate adaptor components.FBX component


Gene families : OG0001029 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001029_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: AMTR_s00198p00016850
Cluster HCCA: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
Adi_g024460 VFB4, SKIP2 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Adi_g105463 VFB4, SKIP2 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Aob_g14932 VFB3 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Aspi01Gene63599.t1 VFB2, Aspi01Gene63599 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.01 OrthoFinder output from all 47 species
Azfi_s0088.g042527 VFB3 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Ceric.20G073200.1 VFB4, SKIP2,... substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Dde_g02819 VFB1 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
GSVIVT01000227001 VFB2 Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
Lfl_g13942 VFB4, SKIP2 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
MA_10431549g0010 VFB4, SKIP2 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_179294g0010 VFB4, SKIP2 component FBX of SCF E3 ubiquitin ligase complex 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0070.g016647 VFB3 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.01 OrthoFinder output from all 47 species
Zm00001e033486_P001 VFB1, Zm00001e033486 component FBX of SCF E3 ubiquitin ligase complex 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 35 68
No external refs found!