AMTR_s00184p00048850 (bHLH093,...)


Aliases : bHLH093, evm_27.TU.AmTr_v1.0_scaffold00184.23

Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor


Gene families : OG0001330 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001330_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00184p00048850

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00085090 evm_27.TU.AmTr_v1... Transcription factor SCREAM2 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT3G26744 ATICE1, ICE1, SCRM basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
Ala_g04435 SCRM2, ICE2 transcription factor *(ICE1/2) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g17032 SCRM2, ICE2 transcription factor *(ICE1/2) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05040 SCRM2, ICE2 transcription factor *(ICE1/2) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene03868.t1 SCRM2, ICE2,... transcription factor *(ICE1/2) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g010652 SCRM2, ICE2 bHLH-type transcription factor & original description: CDS=1-1947 0.02 OrthoFinder output from all 47 species
LOC_Os01g70310.2 ATICE1, ICE1,... transcription factor (bHLH). transcription factor (ICE1|2) 0.02 OrthoFinder output from all 47 species
LOC_Os03g04310.1 bHLH093, LOC_Os03g04310 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_448849g0010 ATICE1, ICE1, SCRM transcription factor (bHLH). transcription factor (ICE1|2) 0.04 OrthoFinder output from all 47 species
Ore_g43201 ATICE1, ICE1, SCRM transcription factor *(ICE1/2) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g30322 ATICE1, ICE1, SCRM transcription factor *(ICE1/2) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08227 SCRM2, ICE2 transcription factor *(ICE1/2) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e021526_P001 ATICE1, ICE1,... transcription factor (bHLH). transcription factor (ICE1|2) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0019321 pentose metabolic process IEP HCCA
BP GO:0019566 arabinose metabolic process IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0046373 L-arabinose metabolic process IEP HCCA
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 128 171
No external refs found!