Aliases : LBD4, evm_27.TU.AmTr_v1.0_scaffold00184.20
Description : RNA biosynthesis.transcriptional activation.AS2/LOB transcription factor
Gene families : OG0000114 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000114_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00021p00187850 | LBD2,... | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.04 | OrthoFinder output from all 47 species | |
AMTR_s00076p00127530 | LBD4,... | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.04 | OrthoFinder output from all 47 species | |
AT1G06280 | LBD2 | LOB domain-containing protein 2 | 0.05 | OrthoFinder output from all 47 species | |
AT1G65620 | AS2 | Lateral organ boundaries (LOB) domain family protein | 0.05 | OrthoFinder output from all 47 species | |
AT3G03760 | LBD20 | LOB domain-containing protein 20 | 0.05 | OrthoFinder output from all 47 species | |
AT4G00220 | LBD30, JLO | Lateral organ boundaries (LOB) domain family protein | 0.03 | OrthoFinder output from all 47 species | |
Adi_g088391 | LBD15, ASL11 | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aev_g38835 | LBD15, ASL11 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g27571 | LBD4 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g00489 | LOB | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Cba_g02965 | LBD4 | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Cba_g33500 | LOB | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ceric.15G046700.1 | LBD4, Ceric.15G046700 | AS2/LOB-type transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g43172 | LBD20 | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dde_g46319 | LBD20 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g32393 | LBD15, ASL11 | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01006269001 | No alias | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.07 | OrthoFinder output from all 47 species | |
GSVIVT01029979001 | LBD20 | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.07 | OrthoFinder output from all 47 species | |
GSVIVT01032592001 | LBD27, SCP | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.06 | OrthoFinder output from all 47 species | |
GSVIVT01032714001 | LBD15, ASL11 | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.02 | OrthoFinder output from all 47 species | |
Gb_14010 | LBD20 | transcription factor (AS2/LOB) | 0.04 | OrthoFinder output from all 47 species | |
Gb_20398 | LBD15, ASL11 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
Gb_20676 | LBD1 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
Gb_21467 | LBD22 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
Gb_29853 | LBD4 | transcription factor (AS2/LOB) | 0.04 | OrthoFinder output from all 47 species | |
Gb_39343 | LBD20 | transcription factor (AS2/LOB) | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os01g14030.1 | LBD2, LOC_Os01g14030 | transcription factor (AS2/LOB) | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os01g56530.1 | LBD20, LOC_Os01g56530 | transcription factor (AS2/LOB) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os03g05500.1 | LBD29, ASL16,... | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os03g41600.1 | ASL1, LBD36,... | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os10g07510.1 | LBD18, LOC_Os10g07510 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
MA_16646g0010 | LBD27, SCP | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
Msp_g44922 | LBD20 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g30887 | LBD4 | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pir_g56591 | LBD15, ASL11 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pp3c4_9600V3.1 | LBD20, Pp3c4_9600 | LOB domain-containing protein 20 | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g09676 | LBD20 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0106.g020253 | AS2 | AS2/LOB-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0188.g025166 | LOB | AS2/LOB-type transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
Solyc01g091420.2.1 | LBD18, Solyc01g091420 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
Solyc01g098220.2.1 | LBD20, Solyc01g098220 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
Solyc03g113360.4.1 | LBD27, SCP,... | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
Solyc12g010810.1.1 | LBD2, Solyc12g010810 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
Spa_g16209 | LBD15, ASL11 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e000390_P001 | LBD29, ASL16,... | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e000391_P001 | LBD29, ASL16,... | transcription factor (AS2/LOB) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e019686_P001 | LBD20, Zm00001e019686 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e030195_P001 | LBD2, Zm00001e030195 | transcription factor (AS2/LOB) | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e042347_P001 | LBD29, ASL16,... | transcription factor (AS2/LOB) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e042443_P001 | LBD29, ASL16,... | transcription factor (AS2/LOB) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e042444_P001 | LBD29, ASL16,... | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e042448_P001 | LBD29, ASL16,... | transcription factor (AS2/LOB) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000155 | phosphorelay sensor kinase activity | IEP | HCCA |
MF | GO:0004673 | protein histidine kinase activity | IEP | HCCA |
MF | GO:0015299 | obsolete solute:proton antiporter activity | IEP | HCCA |
MF | GO:0016775 | phosphotransferase activity, nitrogenous group as acceptor | IEP | HCCA |
MF | GO:0140299 | small molecule sensor activity | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR004883 | LOB | 5 | 105 |
No external refs found! |