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  5. AMTR_s00181p00019930

AMTR_s00181p00019930 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00181.6

Description : Probable 2-oxoglutarate-dependent dioxygenase AOP1 (Fragment) OS=Arabidopsis thaliana


Gene families : OG0002596 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002596_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: AMTR_s00181p00019930
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01035794001 No alias Probable 2-oxoglutarate-dependent dioxygenase AOP1.2... 0.03 OrthoFinder output from all 47 species
Gb_27753 No alias Probable 2-oxoglutarate-dependent dioxygenase JRG21... 0.03 OrthoFinder output from all 47 species
Solyc12g100170.1.1 Solyc12g100170 Probable 2-oxoglutarate-dependent dioxygenase AOP1.2... 0.01 OrthoFinder output from all 47 species
Zm00001e032503_P001 Zm00001e032503 Probable 2-oxoglutarate-dependent dioxygenase AOP1.2... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006743 ubiquinone metabolic process IEP HCCA
BP GO:0006744 ubiquinone biosynthetic process IEP HCCA
BP GO:0042180 cellular ketone metabolic process IEP HCCA
BP GO:0042181 ketone biosynthetic process IEP HCCA
BP GO:1901661 quinone metabolic process IEP HCCA
BP GO:1901663 quinone biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR005123 Oxoglu/Fe-dep_dioxygenase 67 134
No external refs found!