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  5. AMTR_s00180p00054930

AMTR_s00180p00054930 (EMB3003,...)


Aliases : EMB3003, evm_27.TU.AmTr_v1.0_scaffold00180.31

Description : Lipid metabolism.fatty acid synthesis.acetyl-CoA generation.plastidial pyruvate dehydrogenase complex.E2 dihydrolipoamide acetyltransferase component


Gene families : OG0003205 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003205_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00180p00054930

Target Alias Description ECC score Gene Family Method Actions
AT1G34430 EMB3003 2-oxoacid dehydrogenases acyltransferase family protein 0.09 OrthoFinder output from all 47 species
AT3G25860 LTA2, PLE2 2-oxoacid dehydrogenases acyltransferase family protein 0.12 OrthoFinder output from all 47 species
Aev_g28403 LTA2, PLE2 EC_2.3 acyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05120 LTA2, PLE2 EC_2.3 acyltransferase & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g06650 EMB3003 EC_2.3 acyltransferase & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g11385 LTA2, PLE2 EC_2.3 acyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene65095.t1 LTA2, PLE2,... EC_2.3 acyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.12G023000.1 EMB3003, Ceric.12G023000 EC_2.3 acyltransferase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.36G026000.1 LTA2, PLE2,... EC_2.3 acyltransferase & original description:... 0.08 OrthoFinder output from all 47 species
Cre03.g158900 EMB3003 Lipid metabolism.fatty acid synthesis.acetyl-CoA... 0.05 OrthoFinder output from all 47 species
Dac_g00894 EMB3003 EC_2.3 acyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g15875 EMB3003 EC_2.3 acyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01034492001 EMB3003 Lipid metabolism.fatty acid synthesis.acetyl-CoA... 0.12 OrthoFinder output from all 47 species
LOC_Os08g33440.1 LTA2, PLE2,... dihydrolipoamide acetyltransferase component E2 of... 0.05 OrthoFinder output from all 47 species
LOC_Os12g08170.1 EMB3003, LOC_Os12g08170 dihydrolipoamide acetyltransferase component E2 of... 0.05 OrthoFinder output from all 47 species
Len_g18518 EMB3003 EC_2.3 acyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
MA_10433674g0010 EMB3003 dihydrolipoamide acetyltransferase component E2 of... 0.03 OrthoFinder output from all 47 species
Mp4g18690.1 EMB3003 dihydrolipoamide acetyltransferase component E2 of... 0.02 OrthoFinder output from all 47 species
Nbi_g14293 EMB3003 EC_2.3 acyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g48678 LTA2, PLE2 EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g19115 No alias EC_2.3 acyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc05g009530.3.1 LTA2, PLE2,... dihydrolipoamide acetyltransferase component E2 of... 0.1 OrthoFinder output from all 47 species
Solyc11g017250.2.1 EMB3003, Solyc11g017250 dihydrolipoamide acetyltransferase component E2 of... 0.08 OrthoFinder output from all 47 species
Spa_g05166 EMB3003 EC_2.3 acyltransferase & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g31116 LTA2, PLE2 EC_2.3 acyltransferase & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g49559 EMB3003 EC_2.3 acyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e004154_P002 LTA2, PLE2,... dihydrolipoamide acetyltransferase component E2 of... 0.06 OrthoFinder output from all 47 species
Zm00001e018405_P001 EMB3003, Zm00001e018405 dihydrolipoamide acetyltransferase component E2 of... 0.15 OrthoFinder output from all 47 species
Zm00001e022439_P001 LTA2, PLE2,... dihydrolipoamide acetyltransferase component E2 of... 0.15 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0008152 metabolic process IEA Interproscan
MF GO:0016746 acyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
CC GO:0009349 riboflavin synthase complex IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR000089 Biotin_lipoyl 1 69
IPR001078 2-oxoacid_DH_actylTfrase 218 435
IPR004167 PSBD 142 178
No external refs found!