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  5. AMTR_s00177p00064020

AMTR_s00177p00064020 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00177.34

Description : Cyclic nucleotide-gated ion channel 2 OS=Arabidopsis thaliana


Gene families : OG0000170 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000170_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00177p00064020
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
AT2G28260 CNGC15, ATCNGC15 cyclic nucleotide-gated channel 15 0.03 OrthoFinder output from all 47 species
Pir_g33867 ATCNGC10, CNGC10, ACBK1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015121 DND2, CNGC4,... cyclic nucleotide-gated cation channel *(CNGC) &... 0.02 OrthoFinder output from all 47 species
Smo416791 DND1, ATCNGC2, CNGC2 External stimuli response.temperature.temperature... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016853 isomerase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!