AMTR_s00176p00047500 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00176.21

No description available


Gene families : OG0008415 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008415_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00176p00047500
Cluster HCCA:

AMTR_s00101p00054740 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00101.27

No description available


Gene families : OG0004726 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004726_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00101p00054740
Cluster HCCA: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
v_g13283Cluster_102

Target Alias Description ECC score Gene Family Method Actions
Als_g00336 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0198.g057437 No alias not classified & original description: CDS=59-613 0.03 OrthoFinder output from all 47 species
Len_g23364 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g10097 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Solyc03g006540.3.1 Solyc03g006540 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e012176_P001 Zm00001e012176 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!