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  5. AMTR_s00175p00024710

AMTR_s00175p00024710


Description : COMPASS-like H3K4 histone methylase component WDR5A OS=Arabidopsis thaliana


Gene families : OG0001278 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001278_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00175p00024710

Target Alias Description ECC score Gene Family Method Actions
AT3G15470 No alias Transducin/WD40 repeat-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g009424 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g036566 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G113100.1 Ceric.01G113100 not classified & original description: pacid=50591929... 0.04 OrthoFinder output from all 47 species
Dac_g10987 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g06072 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01019618001 No alias COMPASS-like H3K4 histone methylase component WDR5A... 0.03 OrthoFinder output from all 47 species
LOC_Os02g42590.1 LOC_Os02g42590 COMPASS-like H3K4 histone methylase component WDR5A... 0.01 OrthoFinder output from all 47 species
LOC_Os03g02440.1 LOC_Os03g02440 COMPASS-like H3K4 histone methylase component WDR5A... 0.03 OrthoFinder output from all 47 species
LOC_Os11g08400.1 LOC_Os11g08400 COMPASS-like H3K4 histone methylase component WDR5B... 0.05 OrthoFinder output from all 47 species
LOC_Os12g07874.1 LOC_Os12g07874 COMPASS-like H3K4 histone methylase component WDR5B... 0.09 OrthoFinder output from all 47 species
Len_g22473 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15167 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g18244 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g31480 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0065.g015955 No alias not classified & original description: CDS=1-2550 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0210.g025889 No alias not classified & original description: CDS=399-2942 0.02 OrthoFinder output from all 47 species
Smo427312 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc09g010720.3.1 Solyc09g010720 COMPASS-like H3K4 histone methylase component WDR5A... 0.02 OrthoFinder output from all 47 species
Solyc10g086430.3.1 Solyc10g086430 COMPASS-like H3K4 histone methylase component WDR5B... 0.14 OrthoFinder output from all 47 species
Zm00001e000107_P001 Zm00001e000107 COMPASS-like H3K4 histone methylase component WDR5A... 0.04 OrthoFinder output from all 47 species
Zm00001e014768_P003 Zm00001e014768 COMPASS-like H3K4 histone methylase component WDR5A... 0.02 OrthoFinder output from all 47 species
Zm00001e039506_P002 Zm00001e039506 COMPASS-like H3K4 histone methylase component WDR5B... 0.15 OrthoFinder output from all 47 species
Zm00001e041942_P002 Zm00001e041942 COMPASS-like H3K4 histone methylase component WDR5B... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006470 protein dephosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0045454 cell redox homeostasis IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 408 441
IPR001680 WD40_repeat 700 723
IPR001680 WD40_repeat 510 546
IPR001680 WD40_repeat 554 588
No external refs found!