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Aliases : evm_27.TU.AmTr_v1.0_scaffold00173.5
Description : RNA processing.RNA quality control Exon Junction complex (EJC).peripheral components.PININ component
Gene families : OG0004599 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004599_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Aev_g08184 | No alias | component *(PININ) of RNA quality control Exon Junction... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g09559 | No alias | component *(PININ) of RNA quality control Exon Junction... | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g15611 | No alias | component *(PININ) of RNA quality control Exon Junction... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.07G024200.1 | Ceric.07G024200 | component *(PININ) of RNA quality control Exon Junction... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_25266 | No alias | component PININ of RNA quality control Exon Junction complex | 0.03 | OrthoFinder output from all 47 species | |
| Gb_25267 | No alias | component PININ of RNA quality control Exon Junction complex | 0.03 | OrthoFinder output from all 47 species | |
| Gb_25268 | No alias | component PININ of RNA quality control Exon Junction complex | 0.03 | OrthoFinder output from all 47 species | |
| Gb_25269 | No alias | component PININ of RNA quality control Exon Junction complex | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os03g49520.1 | LOC_Os03g49520 | component PININ of RNA quality control Exon Junction complex | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g08493 | No alias | component *(PININ) of RNA quality control Exon Junction... | 0.04 | OrthoFinder output from all 47 species | |
| Mp4g01130.1 | No alias | component PININ of RNA quality control Exon Junction complex | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g15018 | No alias | component *(PININ) of RNA quality control Exon Junction... | 0.06 | OrthoFinder output from all 47 species | |
| Smo410528 | No alias | RNA processing.RNA quality control Exon Junction complex... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g10046 | No alias | component *(PININ) of RNA quality control Exon Junction... | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g10098 | No alias | component *(PININ) of RNA quality control Exon Junction... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e005379_P001 | Zm00001e005379 | component PININ of RNA quality control Exon Junction complex | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e012229_P001 | Zm00001e012229 | component PININ of RNA quality control Exon Junction complex | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006310 | DNA recombination | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| BP | GO:0033554 | cellular response to stress | IEP | HCCA |
| BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006786 | Pinin_SDK_MemA | 170 | 288 |
| No external refs found! |