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  5. AMTR_s00171p00035960

AMTR_s00171p00035960 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00171.13

No description available


Gene families : OG0014472 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0014472_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00171p00035960
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AT1G65710 No alias unknown protein; INVOLVED IN: N-terminal protein... 0.13 OrthoFinder output from all 47 species
AT5G37010 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.11 OrthoFinder output from all 47 species
GSVIVT01033197001 No alias Uncharacterized protein At1g65710 OS=Arabidopsis thaliana 0.14 OrthoFinder output from all 47 species
LOC_Os02g42560.1 LOC_Os02g42560 no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
MA_94884g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc02g081440.4.1 Solyc02g081440 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e007449_P001 Zm00001e007449 Uncharacterized protein At1g65710 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Zm00001e023076_P001 Zm00001e023076 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
Zm00001e041287_P001 Zm00001e041287 Uncharacterized protein At1g65710 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0006184 obsolete GTP catabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0051258 protein polymerization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA

No InterPro domains available for this sequence

No external refs found!