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  5. AMTR_s00169p00063850

AMTR_s00169p00063850 (AGO1,...)


Aliases : AGO1, evm_27.TU.AmTr_v1.0_scaffold00169.41

Description : Chromatin organisation.DNA methylation.canonical RNA-directed DNA methylation pathway.AGO siRNA-integrating factor


Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: AMTR_s00169p00063850

Target Alias Description ECC score Gene Family Method Actions
Ala_g34221 AGO4, OCP11 siRNA-integrating factor *(AGO) & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g05330 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.02 OrthoFinder output from all 47 species
Cba_g07250 PNH, AGO10, ZLL not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g08293 PNH, AGO10, ZLL not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g35792 AGO9 siRNA-integrating factor *(AGO) & original description: none 0.01 OrthoFinder output from all 47 species
Mp1g18110.1 AGO1 RIS-Complex miRNA recruiting factor (AGO1) 0.02 OrthoFinder output from all 47 species
Ore_g05462 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.02 OrthoFinder output from all 47 species
Pir_g01996 PNH, AGO10, ZLL not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003100 PAZ_dom 333 469
IPR003165 Piwi 622 938
IPR014811 ArgoL1 281 330
No external refs found!