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  5. AMTR_s00169p00037240

AMTR_s00169p00037240 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00169.18

Description : Ankyrin repeat protein SKIP35 OS=Arabidopsis thaliana


Gene families : OG0002829 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002829_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: AMTR_s00169p00037240

Target Alias Description ECC score Gene Family Method Actions
Adi_g015974 No alias substrate adaptor *(SKIP35) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Dde_g07385 No alias substrate adaptor *(SKIP35) of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Ehy_g03905 No alias substrate adaptor *(SKIP35) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Len_g12399 No alias substrate adaptor *(SKIP35) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Msp_g10987 No alias substrate adaptor *(SKIP35) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Pir_g10873 No alias substrate adaptor *(SKIP35) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Sam_g18817 No alias substrate adaptor *(SKIP35) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!