Aliases : RPS15A, evm_27.TU.AmTr_v1.0_scaffold00168.6
Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS15a component
Gene families : OG0001724 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001724_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Aev_g20974 | RPS15A | component *(uS8) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g01189 | RPS15A | component *(uS8) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
MA_10427318g0020 | RPS15AD | component RPS15a of SSU proteome | 0.02 | OrthoFinder output from all 47 species | |
MA_82191g0010 | RPS15AD | component RPS15a of SSU proteome | 0.02 | OrthoFinder output from all 47 species | |
Mp8g13010.1 | RPS15A | component RPS15a of SSU proteome | 0.02 | OrthoFinder output from all 47 species | |
Pp3c1_4290V3.1 | RPS15A, Pp3c1_4290 | Ribosomal protein S8 family protein | 0.01 | OrthoFinder output from all 47 species | |
Pp3c3_1140V3.1 | RPS15A, Pp3c3_1140 | ribosomal protein S15A | 0.01 | OrthoFinder output from all 47 species | |
Pp3c4_27540V3.1 | RPS15A, Pp3c4_27540 | Ribosomal protein S8 family protein | 0.01 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005622 | intracellular anatomical structure | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
CC | GO:0005667 | transcription regulator complex | IEP | HCCA |
CC | GO:0005674 | transcription factor TFIIF complex | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
BP | GO:0006367 | transcription initiation at RNA polymerase II promoter | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
BP | GO:0019725 | cellular homeostasis | IEP | HCCA |
BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0042592 | homeostatic process | IEP | HCCA |
BP | GO:0045454 | cell redox homeostasis | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
CC | GO:0090575 | RNA polymerase II transcription regulator complex | IEP | HCCA |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000630 | Ribosomal_S8 | 43 | 166 |
No external refs found! |