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  5. AMTR_s00166p00076690

AMTR_s00166p00076690 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00166.44

Description : Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase guanine nucleotide exchange factor (RAB-GEF) activities.PUF2 plant-specific RAB5 effector


Gene families : OG0003055 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003055_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: AMTR_s00166p00076690

Target Alias Description ECC score Gene Family Method Actions
AT1G24560 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.02 OrthoFinder output from all 47 species
Aev_g24523 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05058 No alias RAB5 plant-specific effector *(PUF2) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11726 No alias RAB5 plant-specific effector *(PUF2) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g42705 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g09367 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07384 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g013780.3.1 Solyc05g013780 plant-specific RAB5 effector (PUF2) 0.04 OrthoFinder output from all 47 species
Tin_g09222 No alias RAB5 plant-specific effector *(PUF2) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e009501_P001 Zm00001e009501 plant-specific RAB5 effector (PUF2) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006904 vesicle docking involved in exocytosis IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
BP GO:0051640 organelle localization IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140029 exocytic process IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA

No InterPro domains available for this sequence

No external refs found!