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  5. AMTR_s00166p00048460

AMTR_s00166p00048460 (RGL2,...)


Aliases : RGL2, evm_27.TU.AmTr_v1.0_scaffold00166.25

Description : External stimuli response.biotic stress.symbiont-associated response.arbuscule branching.MIG1 GRAS-type transcription factor


Gene families : OG0011629 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011629_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00166p00048460

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00166p00053380 LAS, SCL18,... External stimuli response.biotic... 0.02 OrthoFinder output from all 47 species
Solyc01g059960.1.1 RGL2, Solyc01g059960 transcription factor (GRAS). MIG1 GRAS-type transcription factor 0.06 OrthoFinder output from all 47 species
Solyc01g079370.4.1 Solyc01g079370 transcription factor (GRAS). MIG1 GRAS-type transcription factor 0.05 OrthoFinder output from all 47 species
Solyc06g009610.1.1 Solyc06g009610 transcription factor (GRAS). MIG1 GRAS-type transcription factor 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
InterPro domains Description Start Stop
IPR005202 TF_GRAS 128 497
No external refs found!