1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00165p00069630

AMTR_s00165p00069630 (DAR2,...)


Aliases : DAR2, evm_27.TU.AmTr_v1.0_scaffold00165.47

Description : Protein DA1-related 2 OS=Arabidopsis thaliana


Gene families : OG0000918 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000918_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00165p00069630

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene72458.t1 Aspi01Gene72458 ubiquitin-dependent protease *(DA1) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g009729 No alias ubiquitin-dependent protease *(DA1) & original... 0.02 OrthoFinder output from all 47 species
Ceric.11G042400.1 Ceric.11G042400 ubiquitin-dependent protease *(DA1) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g14700 No alias ubiquitin-dependent protease *(DA1) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19833 No alias ubiquitin-dependent protease *(DA1) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07009 No alias ubiquitin-dependent protease *(DA1) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g30224 No alias ubiquitin-dependent protease *(DA1) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g40645 No alias ubiquitin-dependent protease *(DA1) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g26596 No alias ubiquitin-dependent protease *(DA1) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR001781 Znf_LIM 146 200
IPR022087 DA1-like_dom 295 523
No external refs found!