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  5. AMTR_s00164p00050110

AMTR_s00164p00050110 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00164.19

Description : Cellular respiration.oxidative phosphorylation.NADH dehydrogenase complex.non-core components.alpha subcomplex.NDUFA8 component


Gene families : OG0006496 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006496_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00164p00050110
Cluster HCCA: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
AT3G06310 No alias Cox19-like CHCH family protein 0.06 OrthoFinder output from all 47 species
AT5G18800 No alias Cox19-like CHCH family protein 0.07 OrthoFinder output from all 47 species
Ceric.33G034900.1 Ceric.33G034900 component *(NDUFA8/PGIV) of NADH dehydrogenase alpha... 0.04 OrthoFinder output from all 47 species
Cre07.g333900 No alias Cellular respiration.oxidative phosphorylation.NADH... 0.01 OrthoFinder output from all 47 species
Ehy_g00239 No alias component *(NDUFA8/PGIV) of NADH dehydrogenase alpha... 0.04 OrthoFinder output from all 47 species
LOC_Os03g18420.1 LOC_Os03g18420 component NDUFA8 of NADH dehydrogenase alpha subcomplex 0.06 OrthoFinder output from all 47 species
Mp4g15020.1 No alias component NDUFA8 of NADH dehydrogenase alpha subcomplex 0.03 OrthoFinder output from all 47 species
Ore_g09702 No alias component *(NDUFA8/PGIV) of NADH dehydrogenase alpha... 0.03 OrthoFinder output from all 47 species
Pp3c4_6220V3.1 Pp3c4_6220 Cox19-like CHCH family protein 0.02 OrthoFinder output from all 47 species
Smo149059 No alias Cellular respiration.oxidative phosphorylation.NADH... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004576 oligosaccharyl transferase activity IEP HCCA
MF GO:0004579 dolichyl-diphosphooligosaccharide-protein glycotransferase activity IEP HCCA
CC GO:0008250 oligosaccharyltransferase complex IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR010625 CHCH 71 103
No external refs found!