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  5. Aev_g07709

Aev_g07709 (CcdA)


Aliases : CcdA

Description : assembly factor CcdA of CCS cytochrome f/c6 maturation system (system II) & original description: none


Gene families : OG0007286 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007286_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g07709
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00174500 CcdA,... Photosynthesis.photophosphorylation.cytochrome b6/f... 0.08 OrthoFinder output from all 47 species
Adi_g026246 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.05 OrthoFinder output from all 47 species
Ala_g10332 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.05 OrthoFinder output from all 47 species
Aob_g06460 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.05 OrthoFinder output from all 47 species
Aop_g12125 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.05 OrthoFinder output from all 47 species
Cba_g16816 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.06 OrthoFinder output from all 47 species
Ceric.02G048700.1 CcdA, Ceric.02G048700 assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001376.11 CcdA Photosynthesis.photophosphorylation.cytochrome b6/f... 0.01 OrthoFinder output from all 47 species
Dac_g07775 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.05 OrthoFinder output from all 47 species
Dcu_g10730 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.03 OrthoFinder output from all 47 species
Dde_g04751 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.02 OrthoFinder output from all 47 species
GSVIVT01014430001 CcdA Photosynthesis.photophosphorylation.cytochrome b6/f... 0.05 OrthoFinder output from all 47 species
Gb_35619 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.03 OrthoFinder output from all 47 species
LOC_Os11g04500.1 CcdA, LOC_Os11g04500 assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.03 OrthoFinder output from all 47 species
LOC_Os12g04270.1 CcdA, LOC_Os12g04270 assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.03 OrthoFinder output from all 47 species
Lfl_g28455 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.06 OrthoFinder output from all 47 species
Mp5g11540.1 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.02 OrthoFinder output from all 47 species
Msp_g37293 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.05 OrthoFinder output from all 47 species
Nbi_g07517 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.05 OrthoFinder output from all 47 species
Ore_g21830 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.1 OrthoFinder output from all 47 species
Pir_g06323 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.05 OrthoFinder output from all 47 species
Pnu_g13677 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.02 OrthoFinder output from all 47 species
Ppi_g15921 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008168 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.03 OrthoFinder output from all 47 species
Sam_g09743 No alias assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.07 OrthoFinder output from all 47 species
Sam_g28294 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g063570.4.1 CcdA, Solyc07g063570 assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.04 OrthoFinder output from all 47 species
Spa_g16978 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.07 OrthoFinder output from all 47 species
Tin_g31999 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.06 OrthoFinder output from all 47 species
Zm00001e009192_P002 CcdA, Zm00001e009192 assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0017004 cytochrome complex assembly IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR003834 Cyt_c_assmbl_TM_dom 157 364
No external refs found!