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  5. AMTR_s00163p00052870

AMTR_s00163p00052870 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00163.16

Description : Pentatricopeptide repeat-containing protein At5g61990, mitochondrial OS=Arabidopsis thaliana


Gene families : OG0017672 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0017672_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00163p00052870
Cluster HCCA: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00161290 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g19440,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 23 48
IPR002885 Pentatricopeptide_repeat 54 103
No external refs found!