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  5. AMTR_s00162p00078280

AMTR_s00162p00078280 (NIP1;2, NLM2, ATNLM2,...)


Aliases : NIP1;2, NLM2, ATNLM2, evm_27.TU.AmTr_v1.0_scaffold00162.36

Description : Solute transport.channels.MIP family.Nodulin-26-like intrinsic protein (NIP-type)


Gene families : OG0000311 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000311_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00162p00078280
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
Als_g02970 NIP6, NIP6;1, NLM7 Nodulin-26-like intrinsic protein *(NIP) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene15123.t1 NIP7;1, NLM6,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.37G037400.1 NIP6, NIP6;1,... Nodulin-26-like intrinsic protein *(NIP) & original... 0.02 OrthoFinder output from all 47 species
Dde_g14906 NIP6, NIP6;1, NLM7 Nodulin-26-like intrinsic protein *(NIP) & original... 0.03 OrthoFinder output from all 47 species
Len_g01086 NIP6, NIP6;1, NLM7 Nodulin-26-like intrinsic protein *(NIP) & original... 0.02 OrthoFinder output from all 47 species
Len_g27298 NIP1;2, NLM2, ATNLM2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g46693 NIP1;2, NLM2, ATNLM2 Nodulin-26-like intrinsic protein *(NIP) & original... 0.02 OrthoFinder output from all 47 species
Len_g46907 NIP1;2, NLM2, ATNLM2 Nodulin-26-like intrinsic protein *(NIP) & original... 0.02 OrthoFinder output from all 47 species
Lfl_g04549 NIP6, NIP6;1, NLM7 Nodulin-26-like intrinsic protein *(NIP) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEA Interproscan
BP GO:0006810 transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR000425 MIP 47 257
No external refs found!