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  5. AMTR_s00162p00052420

AMTR_s00162p00052420 (CSY3,...)


Aliases : CSY3, evm_27.TU.AmTr_v1.0_scaffold00162.24

Description : Lipid metabolism.lipid degradation.fatty acid degradation.glyoxylate cycle.peroxisomal citrate synthase


Gene families : OG0002699 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002699_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: AMTR_s00162p00052420

Target Alias Description ECC score Gene Family Method Actions
AT3G58740 CSY1 citrate synthase 1 0.03 OrthoFinder output from all 47 species
Adi_g057458 CSY3 citrate synthase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g14584 CSY2 citrate synthase & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0021.g015807 CSY2 citrate synthase & original description: CDS=64-1638 0.02 OrthoFinder output from all 47 species
Ceric.01G069400.1 CSY3, Ceric.01G069400 citrate synthase & original description: pacid=50592334... 0.03 OrthoFinder output from all 47 species
LOC_Os02g13840.1 CSY3, LOC_Os02g13840 citrate synthase 0.02 OrthoFinder output from all 47 species
Mp6g21480.1 CSY3 citrate synthase 0.04 OrthoFinder output from all 47 species
Msp_g17735 CSY3 citrate synthase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20662 CSY3 citrate synthase & original description: none 0.04 OrthoFinder output from all 47 species
Smo411022 CSY2 Lipid metabolism.lipid degradation.fatty acid... 0.02 OrthoFinder output from all 47 species
Smo93920 CSY3 Lipid metabolism.lipid degradation.fatty acid... 0.02 OrthoFinder output from all 47 species
Solyc12g011000.2.1 CSY2, Solyc12g011000 citrate synthase 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0044262 cellular carbohydrate metabolic process IEA Interproscan
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003995 acyl-CoA dehydrogenase activity IEP HCCA
BP GO:0006855 xenobiotic transmembrane transport IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
BP GO:0042908 xenobiotic transport IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0052890 oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor IEP HCCA
InterPro domains Description Start Stop
IPR002020 Citrate_synthase 97 465
No external refs found!