1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00162p00041240

AMTR_s00162p00041240 (RLP29, AtRLP29,...)


Aliases : RLP29, AtRLP29, evm_27.TU.AmTr_v1.0_scaffold00162.17

Description : Phytohormones.signalling peptides.CRP (cysteine-rich-peptide) category.EPF/EPFL family.TMM peptide receptor


Gene families : OG0001645 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001645_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00162p00041240
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
AT1G13230 No alias Leucine-rich repeat (LRR) family protein 0.06 OrthoFinder output from all 47 species
AT1G68780 No alias RNI-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT2G42800 RLP29, AtRLP29 receptor like protein 29 0.05 OrthoFinder output from all 47 species
AT3G25670 No alias Leucine-rich repeat (LRR) family protein 0.05 OrthoFinder output from all 47 species
AT4G28560 RIC7 ROP-interactive CRIB motif-containing protein 7 0.04 OrthoFinder output from all 47 species
Adi_g019113 RLP29, AtRLP29 EPF-peptide co-receptor *(TMM) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g20539 RLP29, AtRLP29 EPF-peptide co-receptor *(TMM) & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g16403 RLP29, AtRLP29 EPF-peptide co-receptor *(TMM) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g23489 No alias EPF-peptide co-receptor *(TMM) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g01011 No alias EPF-peptide co-receptor *(TMM) & original description: none 0.06 OrthoFinder output from all 47 species
Als_g05599 No alias EPF-peptide co-receptor *(TMM) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05616 RLP29, AtRLP29 EPF-peptide co-receptor *(TMM) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g00592 RLP29, AtRLP29 EPF-peptide co-receptor *(TMM) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07146 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene10250.t1 Aspi01Gene10250 EPF-peptide co-receptor *(TMM) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene24028.t1 RIC7, Aspi01Gene24028 EPF-peptide co-receptor *(TMM) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene45717.t1 RLP29, AtRLP29,... EPF-peptide co-receptor *(TMM) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0034.g025440 RLP29, AtRLP29 EPF-peptide co-receptor *(TMM) & original description: CDS=1-1392 0.06 OrthoFinder output from all 47 species
Cba_g02588 No alias EPF-peptide co-receptor *(TMM) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G066800.1 RLP29, AtRLP29,... EPF-peptide co-receptor *(TMM) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.27G029700.1 Ceric.27G029700 not classified & original description: pacid=50605924... 0.08 OrthoFinder output from all 47 species
Ceric.36G021700.1 RLP29, AtRLP29,... EPF-peptide co-receptor *(TMM) & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g08177 RLP29, AtRLP29 EPF-peptide co-receptor *(TMM) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g10843 No alias EPF-peptide co-receptor *(TMM) & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g01642 No alias EPF-peptide co-receptor *(TMM) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07456 No alias EPF-peptide co-receptor *(TMM) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g18503 No alias EPF-peptide co-receptor *(TMM) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01011974001 No alias Piriformospora indica-insensitive protein 2... 0.02 OrthoFinder output from all 47 species
Gb_07431 RLP29, AtRLP29 EPF-peptide receptor (TMM) 0.02 OrthoFinder output from all 47 species
LOC_Os01g52880.1 RLP29, AtRLP29,... Receptor like protein 29 OS=Arabidopsis thaliana... 0.09 OrthoFinder output from all 47 species
LOC_Os05g45430.1 RLP29, AtRLP29,... Receptor like protein 29 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Len_g00585 RLP29, AtRLP29 EPF-peptide co-receptor *(TMM) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g09468 No alias EPF-peptide co-receptor *(TMM) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g11862 RLP29, AtRLP29 EPF-peptide co-receptor *(TMM) & original description: none 0.03 OrthoFinder output from all 47 species
MA_12679g0010 RLP29, AtRLP29 EPF-peptide receptor (TMM) 0.04 OrthoFinder output from all 47 species
MA_218844g0010 No alias EPF-peptide receptor (TMM) 0.03 OrthoFinder output from all 47 species
Msp_g04579 No alias EPF-peptide co-receptor *(TMM) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g06723 No alias EPF-peptide co-receptor *(TMM) & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g23103 RLP29, AtRLP29 EPF-peptide co-receptor *(TMM) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g28173 RLP29, AtRLP29 EPF-peptide co-receptor *(TMM) & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g04017 RLP29, AtRLP29 EPF-peptide co-receptor *(TMM) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g33236 RLP29, AtRLP29 EPF-peptide co-receptor *(TMM) & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g60051 No alias EPF-peptide co-receptor *(TMM) & original description: none 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003114 RLP29, AtRLP29 EPF-peptide co-receptor *(TMM) & original description: CDS=1-1371 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0012.g005652 No alias EPF-peptide co-receptor *(TMM) & original description: CDS=1-1482 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0107.g020320 No alias EPF-peptide co-receptor *(TMM) & original description: CDS=1-1380 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0112.g020763 RIC7 EPF-peptide co-receptor *(TMM) & original description: CDS=1-1410 0.04 OrthoFinder output from all 47 species
Smo126823 RLP29, AtRLP29 Phytohormones.signalling peptides.CRP... 0.05 OrthoFinder output from all 47 species
Smo233841 RLP29, AtRLP29 Phytohormones.signalling peptides.CRP... 0.05 OrthoFinder output from all 47 species
Solyc05g009990.4.1 Solyc05g009990 Piriformospora indica-insensitive protein 2... 0.03 OrthoFinder output from all 47 species
Solyc06g069290.3.1 Solyc06g069290 EPF-peptide receptor (TMM) 0.03 OrthoFinder output from all 47 species
Solyc09g072630.3.1 RIC7, Solyc09g072630 Piriformospora indica-insensitive protein 2... 0.06 OrthoFinder output from all 47 species
Solyc10g007830.1.1 RLP29, AtRLP29,... EPF-peptide receptor (TMM) 0.03 OrthoFinder output from all 47 species
Spa_g05120 RLP29, AtRLP29 EPF-peptide co-receptor *(TMM) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g11953 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g12095 RLP29, AtRLP29 EPF-peptide co-receptor *(TMM) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e017118_P002 Zm00001e017118 Piriformospora indica-insensitive protein 2... 0.07 OrthoFinder output from all 47 species
Zm00001e027467_P001 RLP29, AtRLP29,... Receptor like protein 29 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Zm00001e028221_P001 RLP29, AtRLP29,... Receptor like protein 29 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e032169_P001 RLP29, AtRLP29,... Receptor like protein 29 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 158 180
No external refs found!