AMTR_s00160p00070370 (FUS3,...)

Aliases : FUS3, evm_27.TU.AmTr_v1.0_scaffold00160.24

Description : RNA biosynthesis.transcriptional activation.B3 superfamily.LAV-ABI3 transcription factor

Gene families : OG0001487 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001487_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00160p00070370

Target	Alias	Description	ECC score	Gene Family Method
Adi_g011039	ABI3, SIS10	LAV-ABI3-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g106959	ABI3, SIS10	transcription factor *(ABI3) & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g11555	ABI3, SIS10	transcription factor *(ABI3) & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g41152	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Gb_03009	FUS3	transcription factor (LAV-ABI3)	0.03	OrthoFinder output from all 47 species
Mp5g08310.1	ABI3, SIS10	transcription factor (LAV-ABI3)	0.04	OrthoFinder output from all 47 species
Ore_g18873	ABI3, SIS10	transcription factor *(ABI3) & original description: none	0.01	OrthoFinder output from all 47 species
Solyc06g083590.4.1	ABI3, SIS10,...	transcription factor (LAV-ABI3)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003340	B3_DNA-bd	244	338

External Links

No external refs found!