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  5. AMTR_s00159p00078560

AMTR_s00159p00078560 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00159.30

No description available


Gene families : OG0000791 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000791_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00159p00078560

Target Alias Description ECC score Gene Family Method Actions
AT1G15870 No alias Mitochondrial glycoprotein family protein 0.03 OrthoFinder output from all 47 species
Aop_g00459 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g03591 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g05010.1 LOC_Os01g05010 Uncharacterized protein At2g39795, mitochondrial... 0.02 OrthoFinder output from all 47 species
LOC_Os06g22070.1 LOC_Os06g22070 Uncharacterized protein At2g39795, mitochondrial... 0.03 OrthoFinder output from all 47 species
Pp3c12_23320V3.1 Pp3c12_23320 Mitochondrial glycoprotein family protein 0.02 OrthoFinder output from all 47 species
Ppi_g05005 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000178 exosome (RNase complex) IEP HCCA
MF GO:0004221 obsolete ubiquitin thiolesterase activity IEP HCCA
MF GO:0005048 signal sequence binding IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006621 protein retention in ER lumen IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
BP GO:0032507 maintenance of protein location in cell IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0045185 maintenance of protein location IEP HCCA
MF GO:0046923 ER retention sequence binding IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051651 maintenance of location in cell IEP HCCA
BP GO:0072595 maintenance of protein localization in organelle IEP HCCA
CC GO:1905354 exoribonuclease complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!