AMTR_s00159p00062660 (ABCA1, AtABCA1,...)

Aliases : ABCA1, AtABCA1, evm_27.TU.AmTr_v1.0_scaffold00159.26

Description : Solute transport.primary active transport.ABC superfamily.ABC2 family.subfamily ABCA transporter

Gene families : OG0001787 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001787_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00159p00062660

Target	Alias	Description	ECC score	Gene Family Method
Aev_g14563	ABCA1, AtABCA1	subfamily ABCA transporter & original description: none	0.04	OrthoFinder output from all 47 species
Cre03.g151400	ABCA1, AtABCA1	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
MA_10436531g0010	ABCA1, AtABCA1	ABC transporter A family member 1 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Ore_g40904	ABCA1, AtABCA1	subfamily ABCA transporter & original description: none	0.04	OrthoFinder output from all 47 species
Smo446307	ABCA1, AtABCA1	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003993	acid phosphatase activity	IEP	HCCA
MF	GO:0016791	phosphatase activity	IEP	HCCA
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	1535	1654
IPR003439	ABC_transporter-like_ATP-bd	623	743

External Links

No external refs found!