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  5. AMTR_s00157p00085110

AMTR_s00157p00085110 (ACA5, ATACA5,...)


Aliases : ACA5, ATACA5, evm_27.TU.AmTr_v1.0_scaffold00157.46

Description : Enzyme classification.EC_4 lyases.EC_4.2 carbon-oxygen lyase


Gene families : OG0000437 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000437_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00157p00085110

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00988p00000580 evm_27.TU.AmTr_v1... Enzyme classification.EC_4 lyases.EC_4.2 carbon-oxygen lyase 0.02 OrthoFinder output from all 47 species
AT1G08065 ACA5, ATACA5 alpha carbonic anhydrase 5 0.02 OrthoFinder output from all 47 species
AT2G28210 ATACA2, ACA2 alpha carbonic anhydrase 2 0.02 OrthoFinder output from all 47 species
Aspi01Gene17881.t1 ATACA2, ACA2,... EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g71522 ATACA7, ACA7 EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Gb_20980 ATACA7, ACA7 Alpha carbonic anhydrase 7 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os02g33030.1 CAH1, ACA1,... Alpha carbonic anhydrase 1, chloroplastic OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
LOC_Os04g33660.2 CAH1, ACA1,... Alpha carbonic anhydrase 1, chloroplastic OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os08g32840.1 ATACA7, ACA7,... Alpha carbonic anhydrase 7 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
LOC_Os08g36630.1 ATACA7, ACA7,... Alpha carbonic anhydrase 7 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Lfl_g28701 ATACA2, ACA2 EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
MA_100242g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_78957g0010 ATACA7, ACA7 Alpha carbonic anhydrase 7 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp8g15470.1 ACA4, ATACA4 Alpha carbonic anhydrase 4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Ppi_g48621 ATACA7, ACA7 EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc10g083890.2.1 ATACA7, ACA7,... Alpha carbonic anhydrase 7 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc11g069640.2.1 ATACA7, ACA7,... Alpha carbonic anhydrase 7 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Spa_g03420 ATACA7, ACA7 EC_4.2 carbon-oxygen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e003787_P001 ATACA7, ACA7,... Alpha carbonic anhydrase 7 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e022127_P001 ATACA7, ACA7,... Alpha carbonic anhydrase 7 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR001148 CA_dom 51 261
No external refs found!