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  5. AMTR_s00157p00050570

AMTR_s00157p00050570 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00157.16

No description available


Gene families : OG0001593 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001593_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00157p00050570
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
Aev_g40823 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g46133 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c24_9580V3.1 Pp3c24_9580 HR-like lesion-inducing protein-related 0.02 OrthoFinder output from all 47 species
Spa_g50900 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000178 exosome (RNase complex) IEP HCCA
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP HCCA
MF GO:0008172 S-methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0008898 S-adenosylmethionine-homocysteine S-methyltransferase activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP HCCA
BP GO:0032324 molybdopterin cofactor biosynthetic process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0043545 molybdopterin cofactor metabolic process IEP HCCA
BP GO:0051189 prosthetic group metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
CC GO:1905354 exoribonuclease complex IEP HCCA
InterPro domains Description Start Stop
IPR008637 HR_lesion 1 75
No external refs found!