Aliases : ARF16, evm_27.TU.AmTr_v1.0_scaffold00155.56
Description : RNA biosynthesis.transcriptional activation.B3 superfamily.ARF transcription factor
Gene families : OG0000088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000088_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Adi_g003670 | ARF6 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aev_g08441 | ARF10 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g32717 | ARF8, ATARF8 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Als_g32730 | TIR5, MSG1,... | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g33091 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g49574 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g57848 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aob_g07961 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g12905 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aop_g59651 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g70630 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene06586.t1 | ARF6, Aspi01Gene06586 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aspi01Gene26636.t1 | ARF16, Aspi01Gene26636 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g08681 | ARF6 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os04g36054.1 | ARF1, LOC_Os04g36054 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os05g48870.1 | ARF3, ETT, LOC_Os05g48870 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os11g32110.1 | HSS, ARF1-BP,... | transcription factor (ARF) | 0.04 | OrthoFinder output from all 47 species | |
Lfl_g18657 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Mp1g12750.1 | ARF6 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
Msp_g15236 | ARF1 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g13886 | ARF16 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g10460 | ARF6 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Pnu_g25160 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pnu_g25925 | ARF16 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0084.g018261 | TIR5, MSG1,... | not classified & original description: CDS=484-2670 | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e013639_P001 | ARF19, IAA22,... | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e018126_P002 | ARF6, Zm00001e018126 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e032135_P002 | ARF3, ETT, Zm00001e032135 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e032423_P002 | ARF3, ETT, Zm00001e032423 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
CC | GO:0005634 | nucleus | IEA | Interproscan |
BP | GO:0006355 | regulation of DNA-templated transcription | IEA | Interproscan |
BP | GO:0009725 | response to hormone | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEP | HCCA |
No external refs found! |