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  5. AMTR_s00155p00032400

AMTR_s00155p00032400 (MUR4, UXE1, HSR8,...)


Aliases : MUR4, UXE1, HSR8, evm_27.TU.AmTr_v1.0_scaffold00155.14

Description : Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-L-arabinose synthesis.UDP-D-xylose 4-epimerase


Gene families : OG0000465 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000465_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00155p00032400

Target Alias Description ECC score Gene Family Method Actions
Adi_g055990 UGE5 EC_5.1 racemase or epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g077054 UGE3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g26218 UGE2, ATUGE2 EC_5.1 racemase or epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g10675 UGE2, ATUGE2 EC_5.1 racemase or epimerase & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os04g52730.1 MUR4, UXE1,... UDP-D-xylose 4-epimerase 0.03 OrthoFinder output from all 47 species
Lfl_g12199 No alias EC_5.1 racemase or epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g12835 UGE5 EC_5.1 racemase or epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43306 UGE5 EC_5.1 racemase or epimerase & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g51728 UGE2, ATUGE2 EC_5.1 racemase or epimerase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
BP GO:0044237 cellular metabolic process IEA Interproscan
MF GO:0050662 obsolete coenzyme binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP HCCA
MF GO:0016972 thiol oxidase activity IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0045454 cell redox homeostasis IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR001509 Epimerase_deHydtase 73 334
No external refs found!