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  5. AMTR_s00154p00065510

AMTR_s00154p00065510 (YSL6,...)


Aliases : YSL6, evm_27.TU.AmTr_v1.0_scaffold00154.43

Description : Solute transport.carrier-mediated transport.OPT family.iron chelator transporter (YSL-type)


Gene families : OG0000334 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000334_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00154p00065510
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00027p00045420 ATYSL3, YSL3,... Solute transport.carrier-mediated transport.OPT... 0.04 OrthoFinder output from all 47 species
AMTR_s00029p00090040 YSL7,... Solute transport.carrier-mediated transport.OPT... 0.04 OrthoFinder output from all 47 species
AMTR_s00029p00090440 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.OPT... 0.03 OrthoFinder output from all 47 species
AT3G17650 YSL5, PDE321 YELLOW STRIPE like 5 0.03 OrthoFinder output from all 47 species
AT5G53550 ATYSL3, YSL3 YELLOW STRIPE like 3 0.05 OrthoFinder output from all 47 species
Als_g20697 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.04 OrthoFinder output from all 47 species
Als_g37836 YSL6 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g43225 YSL7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene03882.t1 YSL6, Aspi01Gene03882 ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene52239.t1 YSL7, Aspi01Gene52239 ferric cation-chelator transporter *(YSL) & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene52240.t1 YSL7, Aspi01Gene52240 ferric cation-chelator transporter *(YSL) & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene55143.t1 YSL6, Aspi01Gene55143 ferric cation-chelator transporter *(YSL) & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0665.g081749 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.04 OrthoFinder output from all 47 species
Dac_g22908 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.04 OrthoFinder output from all 47 species
Dde_g07401 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species
Dde_g23625 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.06 OrthoFinder output from all 47 species
GSVIVT01019645001 ATYSL1, YSL1 Nutrient uptake.iron uptake.chelation-based strategy... 0.07 OrthoFinder output from all 47 species
Gb_27981 ATYSL3, YSL3 iron chelator transporter (YSL). ferric cation-chelator... 0.06 OrthoFinder output from all 47 species
Gb_40334 YSL7 iron chelator transporter (YSL). ferric cation-chelator... 0.02 OrthoFinder output from all 47 species
Gb_41263 YSL7 iron chelator transporter (YSL). ferric cation-chelator... 0.03 OrthoFinder output from all 47 species
LOC_Os01g13710.1 YSL7, LOC_Os01g13710 iron chelator transporter (YSL). ferric cation-chelator... 0.02 OrthoFinder output from all 47 species
LOC_Os02g02450.1 YSL8, LOC_Os02g02450 iron chelator transporter (YSL). ferric cation-chelator... 0.02 OrthoFinder output from all 47 species
LOC_Os04g32050.1 YSL6, LOC_Os04g32050 iron chelator transporter (YSL). ferric cation-chelator... 0.02 OrthoFinder output from all 47 species
LOC_Os04g44300.1 YSL7, LOC_Os04g44300 iron chelator transporter (YSL). ferric cation-chelator... 0.07 OrthoFinder output from all 47 species
MA_10431747g0010 YSL7 Probable metal-nicotianamine transporter YSL12 OS=Oryza... 0.03 OrthoFinder output from all 47 species
Mp4g01710.1 YSL6 iron chelator transporter (YSL). ferric cation-chelator... 0.02 OrthoFinder output from all 47 species
Msp_g09049 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.02 OrthoFinder output from all 47 species
Msp_g13893 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.02 OrthoFinder output from all 47 species
Msp_g47952 YSL6 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g52007 YSL6 iron chelator transporter *(YSL) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g11994 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species
Smo179245 YSL6 Nutrient uptake.iron uptake.chelation-based strategy... 0.03 OrthoFinder output from all 47 species
Solyc03g031920.3.1 YSL7, Solyc03g031920 iron chelator transporter (YSL). ferric cation-chelator... 0.03 OrthoFinder output from all 47 species
Solyc08g083060.3.1 ATYSL1, YSL1,... iron chelator transporter (YSL). ferric cation-chelator... 0.07 OrthoFinder output from all 47 species
Spa_g21975 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species
Spa_g26130 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species
Spa_g29812 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species
Spa_g41382 ATYSL1, YSL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e008356_P001 YSL6, Zm00001e008356 iron chelator transporter (YSL). ferric cation-chelator... 0.02 OrthoFinder output from all 47 species
Zm00001e041266_P002 YSL7, Zm00001e041266 iron chelator transporter (YSL). ferric cation-chelator... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004813 OPT 32 230
IPR004813 OPT 254 593
No external refs found!