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  5. AMTR_s00154p00064710

AMTR_s00154p00064710 (YSL4,...)


Aliases : YSL4, evm_27.TU.AmTr_v1.0_scaffold00154.42

Description : Solute transport.carrier-mediated transport.OPT family.iron chelator transporter (YSL-type)


Gene families : OG0000334 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000334_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00154p00064710
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
AT5G53550 ATYSL3, YSL3 YELLOW STRIPE like 3 0.03 OrthoFinder output from all 47 species
Adi_g044334 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.04 OrthoFinder output from all 47 species
Aev_g17873 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.02 OrthoFinder output from all 47 species
Als_g03162 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.02 OrthoFinder output from all 47 species
Als_g37150 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene29925.t1 YSL6, Aspi01Gene29925 ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene29925.t4 YSL6, Aspi01Gene29925 ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01012035001 YSL7 Nutrient uptake.iron uptake.chelation-based strategy... 0.02 OrthoFinder output from all 47 species
GSVIVT01012036001 YSL7 Nutrient uptake.iron uptake.chelation-based strategy... 0.01 OrthoFinder output from all 47 species
GSVIVT01029349001 YSL7 Nutrient uptake.iron uptake.chelation-based strategy... 0.03 OrthoFinder output from all 47 species
Gb_41263 YSL7 iron chelator transporter (YSL). ferric cation-chelator... 0.05 OrthoFinder output from all 47 species
MA_10431747g0010 YSL7 Probable metal-nicotianamine transporter YSL12 OS=Oryza... 0.01 OrthoFinder output from all 47 species
MA_110581g0010 ATYSL3, YSL3 iron chelator transporter (YSL). ferric cation-chelator... 0.02 OrthoFinder output from all 47 species
MA_508161g0010 YSL7 iron chelator transporter (YSL). ferric cation-chelator... 0.02 OrthoFinder output from all 47 species
MA_5602225g0010 YSL7 Probable metal-nicotianamine transporter YSL12 OS=Oryza... 0.01 OrthoFinder output from all 47 species
MA_9934g0010 YSL6 iron chelator transporter (YSL) 0.02 OrthoFinder output from all 47 species
Msp_g09049 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g08018 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.02 OrthoFinder output from all 47 species
Nbi_g40521 YSL7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g42346 YSL6 iron chelator transporter *(YSL) & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g25773 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.02 OrthoFinder output from all 47 species
Ore_g43717 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.02 OrthoFinder output from all 47 species
Pir_g52006 YSL6 iron chelator transporter *(YSL) & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c2_34990V3.1 YSL6, Pp3c2_34990 YELLOW STRIPE like 6 0.02 OrthoFinder output from all 47 species
Sam_g22236 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14612 YSL7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g45079 YSL7 ferric cation-chelator transporter *(YSL) & original... 0.02 OrthoFinder output from all 47 species
Tin_g15178 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e015283_P001 ATYSL3, YSL3,... iron chelator transporter (YSL). ferric cation-chelator... 0.02 OrthoFinder output from all 47 species
Zm00001e023053_P001 YSL7, Zm00001e023053 iron chelator transporter (YSL). ferric cation-chelator... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
InterPro domains Description Start Stop
IPR004813 OPT 2 177
No external refs found!