1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00154p00064550

AMTR_s00154p00064550 (YSL7,...)


Aliases : YSL7, evm_27.TU.AmTr_v1.0_scaffold00154.41

Description : Probable metal-nicotianamine transporter YSL12 OS=Oryza sativa subsp. japonica


Gene families : OG0000334 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000334_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00154p00064550
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00103p00133560 ATYSL3, YSL3,... Solute transport.carrier-mediated transport.OPT... 0.07 OrthoFinder output from all 47 species
AMTR_s00154p00064240 YSL6,... Probable metal-nicotianamine transporter YSL6... 0.03 OrthoFinder output from all 47 species
AT3G17650 YSL5, PDE321 YELLOW STRIPE like 5 0.03 OrthoFinder output from all 47 species
AT4G24120 ATYSL1, YSL1 YELLOW STRIPE like 1 0.03 OrthoFinder output from all 47 species
AT5G53550 ATYSL3, YSL3 YELLOW STRIPE like 3 0.03 OrthoFinder output from all 47 species
Adi_g044334 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.04 OrthoFinder output from all 47 species
Ala_g02368 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.04 OrthoFinder output from all 47 species
Ala_g14056 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.06 OrthoFinder output from all 47 species
Ala_g38157 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.04 OrthoFinder output from all 47 species
Als_g37150 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.02 OrthoFinder output from all 47 species
Aop_g11416 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene03882.t1 YSL6, Aspi01Gene03882 ferric cation-chelator transporter *(YSL) & original... 0.06 OrthoFinder output from all 47 species
Aspi01Gene52304.t1 YSL7, Aspi01Gene52304 ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene55143.t1 YSL6, Aspi01Gene55143 ferric cation-chelator transporter *(YSL) & original... 0.02 OrthoFinder output from all 47 species
Dde_g07401 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.02 OrthoFinder output from all 47 species
Dde_g17548 YSL6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01012035001 YSL7 Nutrient uptake.iron uptake.chelation-based strategy... 0.03 OrthoFinder output from all 47 species
Gb_23122 YSL6 iron chelator transporter (YSL). ferric cation-chelator... 0.04 OrthoFinder output from all 47 species
Gb_40334 YSL7 iron chelator transporter (YSL). ferric cation-chelator... 0.02 OrthoFinder output from all 47 species
LOC_Os04g32060.2 YSL6, LOC_Os04g32060 iron chelator transporter (YSL). ferric cation-chelator... 0.03 OrthoFinder output from all 47 species
LOC_Os04g45900.1 ATYSL2, YSL2,... iron chelator transporter (YSL). ferric cation-chelator... 0.04 OrthoFinder output from all 47 species
MA_10431747g0010 YSL7 Probable metal-nicotianamine transporter YSL12 OS=Oryza... 0.06 OrthoFinder output from all 47 species
MA_10433264g0010 YSL7 Probable metal-nicotianamine transporter YSL12 OS=Oryza... 0.03 OrthoFinder output from all 47 species
Mp4g01710.1 YSL6 iron chelator transporter (YSL). ferric cation-chelator... 0.02 OrthoFinder output from all 47 species
Msp_g09049 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species
Msp_g47952 YSL6 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g17238 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g40521 YSL7 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g42346 YSL6 iron chelator transporter *(YSL) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g52007 YSL6 iron chelator transporter *(YSL) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g22236 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g27056 YSL6 iron chelator transporter *(YSL) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g31649 YSL6 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g38371 YSL5, PDE321 iron chelator transporter *(YSL) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g46259 YSL7 ferric cation-chelator transporter *(YSL) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e007544_P001 YSL7, Zm00001e007544 iron chelator transporter (YSL). ferric cation-chelator... 0.04 OrthoFinder output from all 47 species
Zm00001e008356_P001 YSL6, Zm00001e008356 iron chelator transporter (YSL). ferric cation-chelator... 0.04 OrthoFinder output from all 47 species
Zm00001e023053_P001 YSL7, Zm00001e023053 iron chelator transporter (YSL). ferric cation-chelator... 0.04 OrthoFinder output from all 47 species
Zm00001e026901_P002 YSL7, Zm00001e026901 iron chelator transporter (YSL). ferric cation-chelator... 0.02 OrthoFinder output from all 47 species
Zm00001e041266_P002 YSL7, Zm00001e041266 iron chelator transporter (YSL). ferric cation-chelator... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004813 OPT 49 116
No external refs found!