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  5. AMTR_s00154p00044150

AMTR_s00154p00044150 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00154.26

Description : Germin-like protein 8-2 OS=Oryza sativa subsp. japonica


Gene families : OG0000033 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00154p00044150

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00164000 GLP5,... Putative germin-like protein 9-2 OS=Oryza sativa subsp. japonica 0.05 OrthoFinder output from all 47 species
AMTR_s00089p00122070 evm_27.TU.AmTr_v1... Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.04 OrthoFinder output from all 47 species
AMTR_s00110p00020470 ATGER3, GLP3B,... Germin-like protein subfamily 3 member 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00121p00137080 evm_27.TU.AmTr_v1... Germin-like protein 9-3 OS=Oryza sativa subsp. japonica 0.03 OrthoFinder output from all 47 species
AMTR_s02363p00003720 GLP10,... Germin-like protein 9-3 OS=Oryza sativa subsp. japonica 0.03 OrthoFinder output from all 47 species
Aop_g07026 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene29945.t1 Aspi01Gene29945 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene30646.t1 GLP5, Aspi01Gene30646 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene47748.t1 GLP10, Aspi01Gene47748 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66982.t1 Aspi01Gene66982 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66985.t1 Aspi01Gene66985 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0228.g059053 GLP10 not classified & original description: CDS=1-711 0.03 OrthoFinder output from all 47 species
Dac_g01300 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g51644 GLP5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g11524 GL22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g09346 GLP5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01031085001 No alias Germin-like protein subfamily 1 member 13 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01036097001 GLP5 Putative germin-like protein 9-2 OS=Oryza sativa subsp. japonica 0.03 OrthoFinder output from all 47 species
Gb_17655 GLP7 Germin-like protein 3-1 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Gb_18428 GLP5 Germin-like protein subfamily 2 member 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_24389 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g14670.1 GLP10, LOC_Os01g14670 Germin-like protein 5-1 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os02g29000.1 LOC_Os02g29000 Putative germin-like protein 2-1 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
LOC_Os09g39510.1 GLP5, LOC_Os09g39510 Germin-like protein 9-1 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
LOC_Os09g39520.1 GL22, LOC_Os09g39520 Putative germin-like protein 9-2 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
LOC_Os09g39530.1 GL22, LOC_Os09g39530 Germin-like protein 9-3 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Len_g09344 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_5449g0010 No alias Germin-like protein subfamily 3 member 2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Ore_g00667 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g23278 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g21749 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pp3c23_1420V3.1 GLP5, Pp3c23_1420 germin-like protein 5 0.02 OrthoFinder output from all 47 species
Smo437665 GLP10 No description available 0.03 OrthoFinder output from all 47 species
Solyc11g006980.1.1 Solyc11g006980 Germin-like protein subfamily 3 member 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g37382 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e025458_P001 GLP5, Zm00001e025458 Germin-like protein 1-1 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0045735 nutrient reservoir activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
InterPro domains Description Start Stop
IPR006045 Cupin_1 37 182
No external refs found!