Aliases : ATPUB17, PUB17, evm_27.TU.AmTr_v1.0_scaffold00153.13
Description : U-box domain-containing protein 1 OS=Medicago truncatula
Gene families : OG0000092 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000092_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00001p00030110 | PUB15,... | U-box domain-containing protein 15 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00007p00217990 | evm_27.TU.AmTr_v1... | U-box domain-containing protein 16 OS=Arabidopsis thaliana | 0.06 | OrthoFinder output from all 47 species | |
AMTR_s00086p00031680 | evm_27.TU.AmTr_v1... | U-box domain-containing protein 4 OS=Arabidopsis thaliana | 0.08 | OrthoFinder output from all 47 species | |
AT1G10560 | PUB18, ATPUB18 | plant U-box 18 | 0.04 | OrthoFinder output from all 47 species | |
AT1G60190 | No alias | ARM repeat superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT5G01830 | No alias | ARM repeat superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
Adi_g009233 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Adi_g009234 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g017517 | ATPUB17, PUB17 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Adi_g025518 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g026489 | No alias | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g054040 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Adi_g056335 | PUB8, B80 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Adi_g082530 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aev_g03944 | PUB12, AtPUB12 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aev_g04770 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aev_g09883 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ala_g06664 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g06711 | PUB18, ATPUB18 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g33983 | ATPUB17, PUB17 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g03799 | ATPUB17, PUB17 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g07222 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g16049 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g16594 | PUB14, ATPUB14 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aob_g01685 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aob_g03880 | ATPUB17, PUB17 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Aob_g17483 | PUB15 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g19192 | ATPUB17, PUB17 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene36187.t1 | ATPUB17, PUB17,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene43158.t1 | ATPUB17, PUB17,... | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene44183.t1 | ATPUB17, PUB17,... | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene44184.t1 | ATPUB17, PUB17,... | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene44185.t1 | ATPUB17, PUB17,... | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene44188.t1 | Aspi01Gene44188 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0011.g012763 | PUB12, AtPUB12 | not classified & original description: CDS=1-549 | 0.02 | OrthoFinder output from all 47 species | |
Cba_g02580 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g04504 | ATPUB17, PUB17 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ceric.10G010200.1 | Ceric.10G010200 | not classified & original description: pacid=50612946... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.10G010300.1 | ATPUB17, PUB17,... | not classified & original description: pacid=50611933... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.26G012900.1 | Ceric.26G012900 | not classified & original description: pacid=50598948... | 0.04 | OrthoFinder output from all 47 species | |
Dac_g08066 | ATPUB17, PUB17 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dac_g08480 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Dac_g23493 | PUB18, ATPUB18 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Dac_g23494 | PUB18, ATPUB18 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g01773 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g04450 | ATPUB17, PUB17 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g15895 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g26575 | No alias | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g03920 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g04784 | ATPUB17, PUB17 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g26730 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g02771 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g02800 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g06975 | ATPUB17, PUB17 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ehy_g13215 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g17103 | PUB13, ATPUB13 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01006112001 | PUB8, B80 | U-box domain-containing protein 8 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01021265001 | ATPUB17, PUB17 | U-box domain-containing protein 17 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01032778001 | ATPUB17, PUB17 | U-box domain-containing protein 1 OS=Medicago truncatula | 0.04 | OrthoFinder output from all 47 species | |
Gb_08792 | ATPUB17, PUB17 | U-box domain-containing protein 1 OS=Medicago truncatula... | 0.1 | OrthoFinder output from all 47 species | |
Gb_10627 | PUB8, B80 | U-box domain-containing protein 13 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
Gb_24091 | PUB9, ATPUB9 | U-box domain-containing protein 14 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
Gb_29129 | ATPUB17, PUB17 | U-box domain-containing protein 1 OS=Medicago truncatula... | 0.08 | OrthoFinder output from all 47 species | |
LOC_Os01g72600.1 | LOC_Os01g72600 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os03g32100.1 | LOC_Os03g32100 | U-box domain-containing protein 4 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os05g39930.1 | LOC_Os05g39930 | U-box domain-containing protein 16 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os06g51130.1 | PUB15, LOC_Os06g51130 | U-box domain-containing protein 15 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os08g37570.1 | PUB15, LOC_Os08g37570 | U-box domain-containing protein 15 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
Len_g20959 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Len_g41552 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g04790 | PUB14, ATPUB14 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g27907 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_10329986g0010 | No alias | U-box domain-containing protein 13 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
MA_10431607g0010 | ATPUB17, PUB17 | U-box domain-containing protein 1 OS=Medicago truncatula... | 0.04 | OrthoFinder output from all 47 species | |
MA_69133g0010 | PUB14, ATPUB14 | E3 ubiquitin ligase (PUB) | 0.03 | OrthoFinder output from all 47 species | |
Msp_g08607 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Msp_g09964 | PUB18, ATPUB18 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Msp_g10832 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Msp_g37725 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g02927 | PUB14, ATPUB14 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g38088 | ATPUB17, PUB17 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g05165 | ATPUB17, PUB17 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g20708 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ore_g25238 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ore_g25617 | ATPUB17, PUB17 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g28240 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g28799 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Ore_g28901 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Ore_g34477 | ATPUB17, PUB17 | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
Ore_g35149 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ore_g36544 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pir_g00381 | ATPUB17, PUB17 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Pir_g11319 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g12544 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Pnu_g02760 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g03502 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g17953 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Pnu_g26460 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g06266 | PUB14, ATPUB14 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Smo113592 | No alias | U-box domain-containing protein 2 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
Smo420513 | No alias | U-box domain-containing protein 4 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
Smo75609 | ATPUB17, PUB17 | U-box domain-containing protein 1 OS=Medicago truncatula | 0.05 | OrthoFinder output from all 47 species | |
Solyc03g114160.1.1 | Solyc03g114160 | E3 ubiquitin ligase (PUB) | 0.06 | OrthoFinder output from all 47 species | |
Solyc09g018230.1.1 | Solyc09g018230 | U-box domain-containing protein 16 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g05552 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g11467 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g11468 | PUB14, ATPUB14 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Spa_g18762 | ATPUB17, PUB17 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g25117 | PUB14, ATPUB14 | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
Tin_g01104 | No alias | E3 ubiquiTin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Tin_g21993 | PUB13, ATPUB13 | E3 ubiquiTin ligase *(PUB15) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e014566_P002 | PUB9, ATPUB9,... | E3 ubiquitin ligase (PUB) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e028839_P001 | Zm00001e028839 | U-box domain-containing protein 16 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000151 | ubiquitin ligase complex | IEA | Interproscan |
MF | GO:0004842 | ubiquitin-protein transferase activity | IEA | Interproscan |
MF | GO:0005515 | protein binding | IEA | Interproscan |
BP | GO:0016567 | protein ubiquitination | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005506 | iron ion binding | IEP | HCCA |
MF | GO:0009055 | electron transfer activity | IEP | HCCA |
MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | HCCA |
MF | GO:0020037 | heme binding | IEP | HCCA |
MF | GO:0046906 | tetrapyrrole binding | IEP | HCCA |
No external refs found! |