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  5. AMTR_s00153p00030600

AMTR_s00153p00030600 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00153.10

No description available


Gene families : OG0001854 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001854_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00153p00030600
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01023888001 No alias No description available 0.01 OrthoFinder output from all 47 species
GSVIVT01026659001 No alias No description available 0.03 OrthoFinder output from all 47 species
Msp_g24513 No alias component *(DRC) of DREAM cell cycle regulatory complex... 0.02 OrthoFinder output from all 47 species
Spa_g08113 No alias component *(DRC) of DREAM cell cycle regulatory complex... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006220 pyrimidine nucleotide metabolic process IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
BP GO:0009147 pyrimidine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009211 pyrimidine deoxyribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009219 pyrimidine deoxyribonucleotide metabolic process IEP HCCA
BP GO:0009262 deoxyribonucleotide metabolic process IEP HCCA
BP GO:0009394 2'-deoxyribonucleotide metabolic process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0016597 amino acid binding IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019692 deoxyribose phosphate metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030337 DNA polymerase processivity factor activity IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0043177 organic acid binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
CC GO:0043626 PCNA complex IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
CC GO:0044796 DNA polymerase processivity factor complex IEP HCCA
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP HCCA
BP GO:0046080 dUTP metabolic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
CC GO:0150005 enzyme activator complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!