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  5. AMTR_s00151p00080030

AMTR_s00151p00080030 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00151.17

Description : RNA biosynthesis.transcriptional activation.OFP transcription factor


Gene families : OG0000209 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000209_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00151p00080030
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
AT2G30400 OFP2, ATOFP2 ovate family protein 2 0.04 OrthoFinder output from all 47 species
Adi_g112984 ATOFP7, OFP7 transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25921 No alias transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene32425.t1 Aspi01Gene32425 transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene32428.t1 ATOFP6, OFP6,... transcriptional co-regulator *(OFP) & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene60216.t1 Aspi01Gene60216 transcriptional co-regulator *(OFP) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01030204001 ATOFP1, OFP1 RNA biosynthesis.transcriptional activation.OFP... 0.04 OrthoFinder output from all 47 species
GSVIVT01034649001 ATOFP13, OFP13 RNA biosynthesis.transcriptional activation.OFP... 0.03 OrthoFinder output from all 47 species
LOC_Os03g03480.1 ATOFP6, OFP6,... transcription factor (OFP) 0.03 OrthoFinder output from all 47 species
LOC_Os10g38880.1 OFP8, ATOFP8,... transcription factor (OFP) 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0053.g014147 ATOFP1, OFP1 transcriptional co-regulator *(OFP) & original... 0.03 OrthoFinder output from all 47 species
Solyc10g076180.1.1 OFP4, ATOFP4,... transcription factor (OFP) 0.03 OrthoFinder output from all 47 species
Tin_g11158 ATOFP5, OFP5 transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000448_P001 OFP11, atofp11,... transcription factor (OFP) 0.03 OrthoFinder output from all 47 species
Zm00001e035852_P001 ATOFP7, OFP7,... transcription factor (OFP) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR006458 Ovate_C 111 168
No external refs found!