AMTR_s00150p00049910 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00150.19

Description : RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor


Gene families : OG0000096 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000096_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00150p00049910
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272910 ZFP3,... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
AMTR_s00024p00186840 GIS,... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 OrthoFinder output from all 47 species
AMTR_s00057p00086480 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.06 OrthoFinder output from all 47 species
AMTR_s00088p00145510 ZFP5,... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.05 OrthoFinder output from all 47 species
AT1G10480 ZFP5 zinc finger protein 5 0.05 OrthoFinder output from all 47 species
AT1G13400 JGL, NUB C2H2 and C2HC zinc fingers superfamily protein 0.04 OrthoFinder output from all 47 species
AT1G80730 ZFP1, ATZFP1 zinc-finger protein 1 0.03 OrthoFinder output from all 47 species
AT2G41940 ZFP8 zinc finger protein 8 0.02 OrthoFinder output from all 47 species
AT2G42410 ZFP11, ATZFP11 zinc finger protein 11 0.06 OrthoFinder output from all 47 species
AT3G09290 TAC1 telomerase activator1 0.06 OrthoFinder output from all 47 species
AT3G53820 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G10970 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G57520 ATZFP2, ZFP2 zinc finger protein 2 0.05 OrthoFinder output from all 47 species
Adi_g033743 RAB, RBE C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Adi_g058302 No alias C2H2 subclass ZFP transcription factor & original... 0.04 OrthoFinder output from all 47 species
Adi_g059756 No alias C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Adi_g069225 No alias C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Adi_g079264 ZFP1, ATZFP1 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aev_g00990 ZFP3 C2H2 subclass ZFP transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aev_g04136 No alias C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aev_g04158 No alias C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aev_g07088 No alias C2H2 subclass ZFP transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aev_g16389 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ala_g11579 ZFP8 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ala_g18616 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ala_g22522 KNU C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ala_g22523 KNU C2H2 subclass ZFP transcription factor & original... 0.05 OrthoFinder output from all 47 species
Als_g06187 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g17619 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g26427 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g27336 No alias C2H2 subclass ZFP transcription factor & original... 0.04 OrthoFinder output from all 47 species
Als_g28323 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aob_g12668 No alias C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aob_g23609 No alias C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aop_g13384 ZFP1, ATZFP1 C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aop_g18341 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aop_g44076 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g48295 ZFP5 C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aop_g64420 ZFP1, ATZFP1 C2H2 subclass ZFP transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene18056.t1 Aspi01Gene18056 C2H2 subclass ZFP transcription factor & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene22629.t1 Aspi01Gene22629 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene22630.t1 Aspi01Gene22630 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene25107.t1 Aspi01Gene25107 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene30229.t1 ZFP1, ATZFP1,... C2H2 subclass ZFP transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene51181.t1 KNU, Aspi01Gene51181 C2H2 subclass ZFP transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene51183.t1 ZFP5, Aspi01Gene51183 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene56786.t1 Aspi01Gene56786 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene63795.t1 Aspi01Gene63795 C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene68036.t1 Aspi01Gene68036 C2H2 subclass ZFP transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene68785.t1 Aspi01Gene68785 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0008.g011541 ZFP10, ATZFP10 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0065.g035758 ZFP1, ATZFP1 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g01172 ZFP3 C2H2 subclass ZFP transcription factor & original... 0.04 OrthoFinder output from all 47 species
Cba_g01929 ZFP1, ATZFP1 C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Cba_g28748 No alias C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Cba_g29694 No alias C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ceric.08G040400.1 ZFP7, Ceric.08G040400 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.29G024000.1 Ceric.29G024000 C2H2 subclass ZFP transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dac_g02189 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g03711 ZFP4 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g07348 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g15821 No alias C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dac_g27985 RAB, RBE C2H2 subclass ZFP transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dac_g38400 GIS2 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g00797 No alias C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dcu_g33065 No alias C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dcu_g40465 No alias C2H2 subclass ZFP transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dcu_g42268 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dde_g00494 RAB, RBE C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dde_g31422 ZFP6 C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dde_g39982 ZFP8 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dde_g47144 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g51875 KNU C2H2 subclass ZFP transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ehy_g02089 ZFP1, ATZFP1 C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g04711 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g05520 ZFP3 C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g08072 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g30781 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009401001 ZFP7 RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 OrthoFinder output from all 47 species
GSVIVT01011868001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
GSVIVT01011890001 JAG Zinc finger protein STAMENLESS 1 OS=Oryza sativa subsp. japonica 0.05 OrthoFinder output from all 47 species
GSVIVT01027720001 SUP, FLO10, FON1 RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.05 OrthoFinder output from all 47 species
GSVIVT01031007001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 OrthoFinder output from all 47 species
Gb_03650 ZFP3 C2H2 zinc finger transcription factor 0.05 OrthoFinder output from all 47 species
Gb_27734 ZFP10, ATZFP10 Zinc finger protein 10 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os01g04120.1 LOC_Os01g04120 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
LOC_Os03g41110.1 ZFP7, LOC_Os03g41110 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
LOC_Os03g57240.1 LOC_Os03g57240 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os04g36650.1 ATZFP2, ZFP2,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os04g50070.1 ZFP10, ATZFP10,... C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
LOC_Os07g01180.1 ZFP10, ATZFP10,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os07g40300.1 ZFP7, LOC_Os07g40300 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
LOC_Os08g44190.1 ATZFP2, ZFP2,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os09g26200.1 ZFP3, LOC_Os09g26200 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os09g26210.1 ATZFP2, ZFP2,... C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
LOC_Os09g27320.1 ZFP8, LOC_Os09g27320 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os09g38610.1 ATZFP2, ZFP2,... C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
LOC_Os12g42250.1 LOC_Os12g42250 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Len_g13450 No alias C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Len_g45492 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_424g0010 No alias C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
MA_54742g0010 ZFP6 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Msp_g18741 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g03600 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g16757 No alias C2H2 subclass ZFP transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ore_g30209 ZFP10, ATZFP10 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g34996 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g36220 No alias C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ore_g39947 JAG transcriptional regulator *(JAG/NUB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g45086 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g45087 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g21478 RAB, RBE C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g23317 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pnu_g03825 No alias C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pnu_g13466 No alias C2H2 subclass ZFP transcription factor & original... 0.04 OrthoFinder output from all 47 species
Pnu_g18548 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pnu_g20538 No alias C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pp3c6_19230V3.1 Pp3c6_19230 C2H2 and C2HC zinc fingers superfamily protein 0.02 OrthoFinder output from all 47 species
Ppi_g05059 ZFP1, ATZFP1 C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ppi_g33201 ZFP5 C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ppi_g59122 ZFP5 C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0150.g023323 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sam_g14667 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Solyc01g107430.2.1 ZFP7, Solyc01g107430 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Solyc03g117070.1.1 Solyc03g117070 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Solyc05g006310.3.1 ZFP5, Solyc05g006310 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Solyc09g089590.1.1 SUP, FLO10,... C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Solyc10g078990.1.1 GIS, Solyc10g078990 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Spa_g03417 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g05932 ZFP5 C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Spa_g25706 ZFP1, ATZFP1 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g26185 GIS2 C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Spa_g52372 ZFP1, ATZFP1 C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Tin_g25342 ZFP8 C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Zm00001e000996_P001 ZFP4, Zm00001e000996 C2H2 zinc finger transcription factor 0.06 OrthoFinder output from all 47 species
Zm00001e016256_P001 Zm00001e016256 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e020926_P001 Zm00001e020926 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Zm00001e022212_P001 ZFP8, Zm00001e022212 C2H2 zinc finger transcription factor 0.07 OrthoFinder output from all 47 species
Zm00001e030783_P001 ZFP8, Zm00001e030783 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Zm00001e032639_P001 ZFP10, ATZFP10,... C2H2 zinc finger transcription factor 0.05 OrthoFinder output from all 47 species
Zm00001e036816_P001 ZFP6, Zm00001e036816 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e040612_P001 ZFP11, ATZFP11,... C2H2 zinc finger transcription factor 0.05 OrthoFinder output from all 47 species
Zm00001e040940_P001 ATZFP2, ZFP2,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005244 voltage-gated monoatomic ion channel activity IEP HCCA
MF GO:0005247 voltage-gated chloride channel activity IEP HCCA
MF GO:0005253 monoatomic anion channel activity IEP HCCA
MF GO:0005254 chloride channel activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0006821 chloride transport IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008308 voltage-gated monoatomic anion channel activity IEP HCCA
MF GO:0008509 monoatomic anion transmembrane transporter activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015108 chloride transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022832 voltage-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!