- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : evm_27.TU.AmTr_v1.0_scaffold00148.55
Description : ABC transporter G family member 39 OS=Oryza sativa subsp. japonica
Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00148p00082240 | |
| Cluster | HCCA: Cluster_198 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00069p00191700 | PDR11, ATPDR11,... | Solute transport.primary active transport.ABC... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g14195 | PEN3, ABCG36,... | subfamily ABCG transporter & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g37088 | PDR11, ATPDR11 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene28063.t2 | ABCG40, PDR12,... | subfamily ABCG transporter & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene64035.t1 | PDR6, ATPDR6,... | subfamily ABCG transporter & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g32414 | PEN3, ABCG36,... | subfamily ABCG transporter & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g22063 | PDR6, ATPDR6 | subfamily ABCG transporter & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01024743001 | ATPDR3, PDR3 | Solute transport.primary active transport.ABC... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_28918 | ABCG40, PDR12,... | subfamily ABCG transporter | 0.01 | OrthoFinder output from all 47 species | |
| Lfl_g05743 | ABCG40, PDR12,... | subfamily ABCG transporter & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_12965g0010 | ABCG40, PDR12,... | subfamily ABCG transporter | 0.02 | OrthoFinder output from all 47 species | |
| MA_949447g0010 | ABCG40, PDR12,... | subfamily ABCG transporter | 0.01 | OrthoFinder output from all 47 species | |
| MA_954551g0010 | PDR1, ATPDR1 | subfamily ABCG transporter | 0.06 | OrthoFinder output from all 47 species | |
| Msp_g14205 | ATPDR7, PDR7 | subfamily ABCG transporter & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g38848 | PDR6, ATPDR6 | subfamily ABCG transporter & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g08198 | PEN3, ABCG36,... | subfamily ABCG transporter & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0071.g016875 | ATPDR3, PDR3 | subfamily ABCG transporter & original description: CDS=1-2793 | 0.01 | OrthoFinder output from all 47 species | |
| Smo96758 | ABCG40, PDR12,... | Solute transport.primary active transport.ABC... | 0.01 | OrthoFinder output from all 47 species | |
| Spa_g21976 | PEN3, ABCG36,... | subfamily ABCG transporter & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Tin_g08759 | PEN3, ABCG36,... | subfamily ABCG transporter & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
No InterPro domains available for this sequence
| No external refs found! |