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  5. AMTR_s00147p00061530

AMTR_s00147p00061530 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00147.23

No description available


Gene families : OG0001409 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001409_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00147p00061530
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001487.8 No alias No description available 0.01 OrthoFinder output from all 47 species
Msp_g17265 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g06651 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g06652 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e004041_P003 Zm00001e004041 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 10 75
No external refs found!