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  5. AMTR_s00146p00018170

AMTR_s00146p00018170 (CLPS3,...)


Aliases : CLPS3, evm_27.TU.AmTr_v1.0_scaffold00146.2

Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.ITS2 rRNA removal.GRC3 polynucleotide kinase


Gene families : OG0003520 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003520_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: AMTR_s00146p00018170

Target Alias Description ECC score Gene Family Method Actions
Aop_g22381 CLPS3 component *(Clp1) of Cleavage Factor II (CF-IIm) complex... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020537.71 CLPS3 RNA processing.RNA 3-end polyadenylation.Cleavage Factor... 0.02 OrthoFinder output from all 47 species
LOC_Os02g12570.1 CLPS3, LOC_Os02g12570 component Clp1 of Cleavage Factor II (CF-IIm) complex 0.02 OrthoFinder output from all 47 species
Ppi_g02154 CLPS3 component *(Clp1) of Cleavage Factor II (CF-IIm) complex... 0.02 OrthoFinder output from all 47 species
Zm00001e024954_P001 CLPS3, Zm00001e024954 component Clp1 of Cleavage Factor II (CF-IIm) complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0008612 peptidyl-lysine modification to peptidyl-hypusine IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
InterPro domains Description Start Stop
IPR010655 Clp1_C 522 721
IPR010655 Clp1_C 243 424
No external refs found!