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  5. AMTR_s00145p00085470

AMTR_s00145p00085470 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00145.32

No description available


Gene families : OG0001714 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001714_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00145p00085470
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
AT2G28140 No alias Protein of unknown function (DUF1635) 0.05 OrthoFinder output from all 47 species
Aop_g07738 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g02268 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01016212001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_26573 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os04g05070.1 LOC_Os04g05070 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g02450.1 LOC_Os05g02450 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Lfl_g29364 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10436300g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_39107g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pnu_g07823 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004712 No alias not classified & original description: CDS=1-1362 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0033.g011012 No alias not classified & original description: CDS=1-1773 0.02 OrthoFinder output from all 47 species
Solyc11g008080.3.1 Solyc11g008080 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e027626_P003 Zm00001e027626 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006457 protein folding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
InterPro domains Description Start Stop
IPR012862 DUF1635 18 257
No external refs found!