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  5. AMTR_s00142p00112300

AMTR_s00142p00112300 (FATB,...)


Aliases : FATB, evm_27.TU.AmTr_v1.0_scaffold00142.75

Description : Palmitoyl-acyl carrier protein thioesterase, chloroplastic OS=Gossypium hirsutum


Gene families : OG0000593 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000593_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00142p00112300

Target Alias Description ECC score Gene Family Method Actions
Als_g04908 FATB not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g32409 No alias oleoyl-ACP thioesterase *(FATA) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g011165 FaTA, AtFaTA oleoyl-ACP thioesterase *(FATA) & original description:... 0.02 OrthoFinder output from all 47 species
Cba_g27295 No alias oleoyl-ACP thioesterase *(FATA) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g39347 FATB not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g13165 No alias oleoyl-ACP thioesterase *(FATA) & original description: none 0.03 OrthoFinder output from all 47 species
Gb_17544 FATB palmitoyl-ACP thioesterase. palmitoyl-ACP thioesterase (FatM) 0.03 OrthoFinder output from all 47 species
MA_181472g0010 FATB Palmitoyl-acyl carrier protein thioesterase,... 0.06 OrthoFinder output from all 47 species
Msp_g04489 No alias oleoyl-ACP thioesterase *(FATA) & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c15_18050V3.1 FATB, Pp3c15_18050 fatty acyl-ACP thioesterases B 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0034.g011238 FATB not classified & original description: CDS=988-2130 0.02 OrthoFinder output from all 47 species
Sam_g07310 No alias oleoyl-ACP thioesterase *(FATA) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g02613 FATB not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g07711 FATB not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e030610_P001 FATB, Zm00001e030610 palmitoyl-ACP thioesterase 0.03 OrthoFinder output from all 47 species
Zm00001e037362_P001 FATB, Zm00001e037362 palmitoyl-ACP thioesterase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006633 fatty acid biosynthetic process IEA Interproscan
MF GO:0016790 thiolester hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
InterPro domains Description Start Stop
IPR021113 Acyl-ACP-thioesterase_N 1 127
IPR002864 Acyl-ACP_thioesterase 139 214
No external refs found!