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  5. AMTR_s00142p00063260

AMTR_s00142p00063260 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00142.35

Description : Phytohormones.strigolactone.perception and signal transduction.DLK2 signal transducer


Gene families : OG0000908 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000908_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00142p00063260
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
Adi_g007506 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g074812 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g01253 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g10686 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0060.g034847 No alias not classified & original description: CDS=193-999 0.03 OrthoFinder output from all 47 species
Gb_04496 No alias DLK2 strigolactone signal transducer 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!