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  5. AMTR_s00140p00061590

AMTR_s00140p00061590 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00140.26

Description : RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor


Gene families : OG0002003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002003_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00140p00061590

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00086440 STOP1,... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 OrthoFinder output from all 47 species
Adi_g114535 STOP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g07437 STOP1 C2H2-type subclass STOP transcription factor & original... 0.02 OrthoFinder output from all 47 species
LOC_Os08g44830.1 LOC_Os08g44830 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Mp8g12510.1 STOP1 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Solyc04g056320.3.1 STOP1, Solyc04g056320 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Solyc11g066420.1.1 Solyc11g066420 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!