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  5. AMTR_s00140p00038880

AMTR_s00140p00038880 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00140.12

Description : Cell cycle.regulation.cyclin-dependent kinase complex.CKS scaffolding component


Gene families : OG0002701 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002701_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: AMTR_s00140p00038880

Target Alias Description ECC score Gene Family Method Actions
Cre03.g180350 No alias Cell cycle.regulation.cyclin-dependent kinase... 0.08 OrthoFinder output from all 47 species
Dac_g26714 CKS2 scaffold component *(CKS) of cyclin-dependent kinase... 0.03 OrthoFinder output from all 47 species
Dde_g25426 CKS1AT, CKS1 scaffold component *(CKS) of cyclin-dependent kinase... 0.02 OrthoFinder output from all 47 species
LOC_Os03g05300.1 LOC_Os03g05300 scaffolding component CKS of cyclin-dependent kinase complex 0.06 OrthoFinder output from all 47 species
MA_156774g0010 CKS1AT, CKS1 scaffolding component CKS of cyclin-dependent kinase complex 0.02 OrthoFinder output from all 47 species
MA_364061g0010 CKS1AT, CKS1 scaffolding component CKS of cyclin-dependent kinase complex 0.03 OrthoFinder output from all 47 species
MA_475176g0010 CKS2 scaffolding component CKS of cyclin-dependent kinase complex 0.12 OrthoFinder output from all 47 species
MA_66022g0010 CKS1AT, CKS1 scaffolding component CKS of cyclin-dependent kinase complex 0.02 OrthoFinder output from all 47 species
Mp1g16700.1 No alias scaffolding component CKS of cyclin-dependent kinase complex 0.05 OrthoFinder output from all 47 species
Pp3c2_6200V3.1 Pp3c2_6200 CDK-subunit 2 0.02 OrthoFinder output from all 47 species
Sam_g26303 No alias scaffold component *(CKS) of cyclin-dependent kinase... 0.01 OrthoFinder output from all 47 species
Spa_g48395 CKS1AT, CKS1 scaffold component *(CKS) of cyclin-dependent kinase... 0.02 OrthoFinder output from all 47 species
Zm00001e000375_P001 CKS1AT, CKS1,... scaffolding component CKS of cyclin-dependent kinase complex 0.17 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007049 cell cycle IEA Interproscan
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000789 Cyclin-dep_kinase_reg-sub 3 72
No external refs found!