AMTR_s00138p00036780 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00138.15

Description : RNA biosynthesis.transcriptional activation.PLATZ transcription factor


Gene families : OG0000228 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000228_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00138p00036780

Target Alias Description ECC score Gene Family Method Actions
Adi_g056182 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g09518 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g29417 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01031929001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.08 OrthoFinder output from all 47 species
LOC_Os02g07650.1 LOC_Os02g07650 transcription factor (PLATZ) 0.02 OrthoFinder output from all 47 species
LOC_Os08g44620.1 LOC_Os08g44620 transcription factor (PLATZ) 0.04 OrthoFinder output from all 47 species
Len_g57822 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g37520 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_14971g0010 No alias transcription factor (PLATZ) 0.07 OrthoFinder output from all 47 species
Mp1g07250.1 No alias transcription factor (PLATZ) 0.02 OrthoFinder output from all 47 species
Mp3g06190.1 No alias transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
Nbi_g24269 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g07254 No alias PLATZ-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Smo412053 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.02 OrthoFinder output from all 47 species
Tin_g07994 No alias PLATZ-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e002426_P001 Zm00001e002426 transcription factor (PLATZ) 0.02 OrthoFinder output from all 47 species
Zm00001e007100_P003 Zm00001e007100 transcription factor (PLATZ) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0045454 cell redox homeostasis IEP HCCA
InterPro domains Description Start Stop
IPR006734 PLATZ 43 114
No external refs found!